Salvelinus fontinalis (brook trout): 129868837
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Entry
129868837 CDS
T11136
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129868837
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Protocadherins
129868837
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
129868837
NCBI-ProteinID:
XP_055799092
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Position
13:48732471..48738168
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AA seq
1004 aa
AA seq
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MDLRGAKRRLGGIWQLTCLALVVCVLDLVWAQIRYSIPEELEHGAFVGNIADDLGLDVER
LSARRFRIVSGAKKQYLEVNLENGILFVNEIIDREELCEQSLSCSFHLQVVIENPLELYR
VEVEILDVNDNSPSFPWSEFNLDISESAVPGSRFPLESAQDLDVGSNSLRSYLLSVNEHF
VLDIQTRSDGSKFAELVLESPLDREQQNTHQMVLTAVDGGSPERSGTAQINITVLDANDN
APVFDQSFYRVRLVENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRELFSVDSR
TGEIRVKGVVDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNILDVNDNLPEVILTSVSTP
VQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTCDFLDRETV
PEYNITLTARDMGAPPLFTRKTILVQVSDMNDNTPRFKQPSYTVYLTENNAPGASICSVT
ALDPDSDQNAYLSYSILENDIQGMPVSTYVSINSDNGNIYALRSFDHEQLRNFQILVQAQ
DAGFPPLRTNVTVNVFILDQNDNAPVIVAPLPQNGTAATEVVPRSVDAGYLVAKITAMDA
DAGQNSRLFYQVLQANDPSLFSVALYTGEIRTIRRFVEKDPIRQMLVILVKDNGQTPLSA
TVSIILSVVDNVPESLPDFGDLTLSPQYRSNLTLYLIVSLGVISFTFLVAIIVLAAIKGY
RDRHSIRRYNCSLSACCGFRSEESTTDVFKKSNLNVQITTSTKGSTNCVEANGNGPLSQP
YCYKMCLTPESSKSEFMFLKSCSPMNATPQKNNAKGADYPKSGWSAQDSRSLIVNNGATI
PNELKQANMDWTLTKNLRNSAHKSFSSMERTFPRRPRPDPDGFSCPVAQQYYTWGSHMRE
YKMSSQVEGIGEVGSVGSAGRIPNRSWTPSYTQPPSAQPPPDYQHNVYIPGTPSGYCTLK
PAPRGELDVYNSFSTFGKNKRFISSYDPSFDQREDNLINKDFFK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggacctccgaggcgcaaagagacggcttggggggatatggcagttgacatgcctagct
ctcgtcgtatgtgtcctggatttagtttgggctcagattcgttattcaatccctgaggaa
ctggaacatggcgcttttgttggaaatatagccgatgacttgggtttagacgtcgagaga
ctctctgcgcgcaggttcaggatagtttcaggagcaaaaaagcaatacttggaggtgaat
ttagaaaatggtattttatttgtaaacgaaataattgatcgagaggaactatgtgaacag
agtctgtcttgctctttccatttgcaagtggtaatcgaaaacccattggaactgtacagg
gttgaggtggagattttagatgtgaacgataactcacccagttttccgtggagtgagttt
aatttggatatatccgagtcggcggtccccgggtcccgcttcccactagagagcgcgcag
gacttggacgttggcagcaactcgctccgctcttatctgctgagtgtgaatgaacatttt
gtcctggacatccagacgcgtagtgatggcagtaagtttgcggagttggtcctggagagc
cccttggacagagagcagcagaatacgcaccaaatggtgctgacggctgtggatggaggc
tcgccagaaagatccgggacagcgcaaatcaatataacagttctggatgcaaatgacaac
gcgcccgtgttcgaccagtctttctacagagtgaggcttgtggaaaacgcaccgaagggc
accgttgtgataaaactaaacgcatcggatttggatgagggtcctaatgcggatatcaca
tactctttcagcgggcatgctcccataaaagtgcgcgagcttttcagtgtggattcgcgc
actggagagattagagtgaaaggggtcgtagattatgaaaaggccaggatgcatgagata
tatgtgcaagccaaggacaagggcccatcggcagtggccgtgcactgtaaagttctggtc
aatatcttagatgtgaatgacaacctcccggaggtgatcttgacatcagtgtccacacct
gtccaagaggacgccccaccggggactgtgatagctgtcatcagcgtcatggacaaagac
tcaggtgaaaatgggaatgttgactgtgaaattccacatcatgtccccttccagctccac
tcctcttttaagaactattacactttggttacttgtgattttttggacagagagacggtg
ccagagtacaacatcactctcacagcaagagatatgggcgcacctcccttgttcacaagg
aaaactattttagttcaagtgtcagacatgaacgacaacacaccccgattcaagcagcca
tcatacaccgtctatttgacagagaataacgcaccaggagcctcaatttgctcggttact
gccctggatccagattccgaccaaaatgcctatctctcttactctattctggaaaatgat
atacaggggatgcccgtgtccacctacgtctccataaactcagacaacgggaatatctac
gcattgcgttcttttgaccatgagcagctaagaaactttcagattttagtccaagcacaa
gatgccgggtttccacccctgagaaccaatgttaccgtaaatgtctttattttggaccaa
aatgacaatgcaccagtcatagtagcacctctaccccaaaacggcaccgcggcgactgaa
gttgtgcccaggtcagttgatgctggctatcttgtggcaaaaatcactgcgatggacgca
gacgcaggtcaaaactcgcgtctgttctaccaggtgctccaggcaaacgacccgagcctg
tttagcgtcgccctgtacacgggcgaaatcaggacgattcgccgatttgtggaaaaagac
cccataaggcaaatgctggtcattctggtcaaggacaacggtcagacacccctttcggcc
acagtttccatcatcctgtcagttgttgacaacgtgccagaatcgctgcctgatttcggc
gacctcacactgagcccccagtaccgctcgaacctcacgctgtacttaatagtgtctctg
ggcgttatctcgttcacgtttctggtggctattatcgtcctggcagcgataaagggatac
agggacagacattccattcggaggtataactgctctctgagtgcatgctgcgggttccga
tcagaggagtctaccactgatgtgttcaagaagtccaacttgaacgtgcagataaccaca
agcaccaaaggatccacgaactgcgttgaggcaaatggcaacggccccctttctcagcca
tactgctacaagatgtgtctgaccccggaatcatccaagagcgagttcatgttcctaaag
tcatgcagtccaatgaatgcgactccacagaagaataatgccaagggcgcagactacccc
aaatcgggttggagcgcacaggactcccgcagcctgatagtgaacaacggagcaactatt
ccgaacgagctcaagcaagcgaacatggactggacattgacgaaaaatctaagaaattca
gcacacaaaagctttagctccatggagaggaccttcccacgtagacccaggccggacccg
gatggcttttcctgcccggtggcacaacagtactatacctggggtagtcatatgcgtgaa
tacaagatgtcctcccaggtcgaagggattggagaggtaggaagtgttggaagtgcagga
aggattccaaaccgttcgtggactccgagctacacccagcctccatctgcacagccacca
cctgactaccagcacaacgtctacatccctggcacaccgtctgggtactgcactctgaag
cctgcacccaggggggaactggatgtctacaactcattctctacgtttggaaagaataag
aggttcatctctagctatgacccgagctttgaccagagagaggacaacctgataaacaag
gacttttttaaatga
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