Salvelinus fontinalis (brook trout): 129868861
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Entry
129868861 CDS
T11136
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129868861
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129868861
Surveillance factors
Other surveillance factors
129868861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
129868861
NCBI-ProteinID:
XP_055799150
LinkDB
All DBs
Position
13:49548733..49567070
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AA seq
1053 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGGCVTSPPPSPAMPKSKLADYRYGRE
EMLALYIKDNKPPEDMQDKEFAAIMQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLMG
KGGGAAPVGVARGRGGCIRGGRGRGRGEGAFYQRAPGGPDEGEVGFGRGREMLRSQSWDD
RAERPRFEKPIRCAEVVRPGFEEAGTLGRKDSWRADSDNWRTLREEEEEAAAAAGGEQPA
WRVAGSRRDDGGPRSAGWRDRGGRRKFEFDFRDGEGPRRESDRDGLPEWCTEEEDGEMGT
FDSSGAFMCIKKDCKDTITEEDLEFEALEEEEENDQGGKDNYADRDECEAAGEGEDKYKT
PSPPAISGSPPSDPLPVPCATQAPISHPAKTNYVPAEGCPLPERGVQLSPDPPATTSSLM
PPPSGSLLPSTGGEAEEDEGMKHLQQEAEKMVASLQDTSLEEECFTQALQESHTITSHSH
THPAPHSHTHAAGHTHSHSTHRDCALPLSHEAAMKWFYKDPQGEIQGPFSTVEMCEWFQA
GYFTMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLVRQPPPSRGSSGNMDQEL
LKKHLEQAATAALYQQLQMRFQHMNRSGDSSMMPSMNRSMSIPDNGSMWDMHTSASQQSG
GEANLWDLTMSHSTQGPSLEQLQKLQDRREAELRAKREEEERKRQVEKRRQQEEQKRRDE
EELYRRKQQCRQQQELIMKLLQQAQPGAPGCVSGSGWSGSQASALSKQGKSLGLLELETE
RLLKQQAQHQRAQHQRERHGGLSMGQWGEGSVGMWSGGGMEPKGSSGGMGVWEEAVKNQN
SLRNMGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKLLQGMKPQDGFTTWCEQMLHALNTS
ANNSSSSLDVATIVAYLKEVESPYEVHDFIRSYLGDTAEAKEFAKQFLERRAKQKANHQR
QQQQQQKTLSVTTIPLPHQLSKEVSGLSMNNFPIQSMFQAAQMGKGGMYDSQAAKMKKKQ
TMMLHSDPSILGYSFLGAGERMNLGEMETVEDY
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacctaaacttgaggctccgtgcactatccagaggggggtgtgtgacgtcc
ccccctccttctccagccatgccaaagtccaagttggctgattaccgctatggccgcgaa
gagatgctagcactttatatcaaagataacaagcccccagaggacatgcaggataaggag
tttgctgctatcatgcaggatgagcctgtgcagcctttggccctggagcctctaactgag
gaggagcagagaaacttttccatgtctgtgaacagtgtggctgtgctgaggctgatggga
aagggaggcggggctgcccctgtaggcgtggctaggggccgtggaggatgcatcagagga
ggtagagggagagggagaggtgaaggtgcattctaccaaagagctcctggaggtcctgat
gaaggagaggtgggcttcggtcgtggccgagaaatgctccgcagccaaagctgggatgac
cgagctgagaggccaaggtttgagaagccaatcaggtgtgctgaagtagtgcgtccaggg
ttcgaagaggcggggactctgggcaggaaggactcctggcgtgccgacagtgacaactgg
cgtaccctccgagaggaggaggaagaggcagcagcagcagcaggaggagagcagccagcc
tggagagttgcaggatctcgtcgtgatgatggaggtcctcgttctgcaggctggcgtgat
cgtggcggccggaggaagtttgagtttgacttccgtgacggcgagggcccccgcagggaa
tccgacagggacggccttccggagtggtgcaccgaagaggaggatggagagatgggaacc
tttgactcctctggggccttcatgtgcatcaagaaagactgtaaggacaccatcactgaa
gaggatctggagtttgaagctctggaggaagaggaggagaatgatcagggaggcaaggac
aactacgctgacagagatgaatgtgaagcagcaggtgagggagaagataagtacaagact
ccttctcctcctgccatctctggctctccaccttcagaccctcttcctgtcccctgcgcc
acacaggcacccatctcccatcccgccaaaacgaactatgtgcccgctgaaggctgccca
cttccagagaggggtgtgcagctcagcccagacccccccgccaccacctccagcctgatg
cctcctccctctggatctctcctcccttcaacagggggagaagcggaggaggatgaaggc
atgaagcacctgcaacaggaggctgaaaagatggtggcctcactgcaggacacctccctt
gaggaggagtgtttcactcaagcactacaggagagccacaccatcacctctcactctcac
acacacccagccccacactcacacacgcacgccgctggacacacacactctcactcgacc
catagggactgtgccctgcccctctcccacgaggcagccatgaagtggttctacaaggac
ccccagggagagatccaaggtcccttctccacggtggagatgtgtgagtggttccaggcc
ggctacttcaccatgaccctgctggtaaagaggggttgtgatgagggcttccaacccctg
ggtgatgtcatcaaaatgtggggccgcgtgcccttctcccccggcccctcccccccgccc
ctcctggtgagacagcccccaccatctcgggggtcctctggcaatatggaccaggagctg
ctgaagaaacatttggagcaggcagccactgcagctctataccagcaactacagatgagg
ttccagcacatgaacaggagtggagattctagcatgatgccctcgatgaacaggtccatg
tcaatacctgataatgggtccatgtgggacatgcatacctcggcctcccagcagtcaggt
ggtgaggccaacctatgggacttaaccatgagtcattccactcaggggccatctctggag
cagctacagaagctccaggaccggcgtgaggctgaactcagggccaagcgagaggaggag
gagcggaagcggcaggtcgagaagaggaggcagcaggaggaacagaagaggcgtgatgag
gaggaactgtacaggcgtaagcagcagtgtcggcagcagcaggagctgatcatgaagctg
ctgcagcaggcccagcccggggccccagggtgtgtctctgggtcagggtggagtggctcc
caggcctcagccctctccaaacaaggcaagagcctcggcctgctggagctggagaccgag
aggctgctcaaacagcaggcccagcaccagagggcccaacatcagagagaaaggcatgga
ggcttgtctatgggccagtggggtgaggggtctgtgggcatgtggtctggtgggggcatg
gagcccaaaggcagctctggagggatgggtgtctgggaggaggctgtgaagaaccaaaac
agcctccgcaatatgggcatgaagaacagccgcagcagcccatctctcagtgagcagtac
atgctgaggaagaagcgtacagaggaggaggacaagctgctgaaactgctgcagggcatg
aagccccaggatggcttcaccacctggtgtgaacagatgctacacgcacttaacacctcc
gctaacaactcctcctcctcactggacgtggcaaccatcgtggcctacctgaaggaggtg
gagtctccctacgaggtccatgactttatccgctcctacctgggcgacaccgcggaagcc
aaagagttcgccaaacagttcctggagcgccgagccaaacagaaagccaaccaccagaga
caacagcagcaacaacagaagaccttatcagtaaccaccatccctctccctcaccagcta
tcaaaagaagtttcagggctgtccatgaacaactttcctatccagtccatgttccaggca
gcccagatgggaaagggaggaatgtatgacagccaggctgcaaagatgaagaagaaacag
accatgatgcttcactctgaccctagcatcttaggatattcgttcctgggcgctggggag
agaatgaacctgggcgagatggaaacagtggaggattattga
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