Salvelinus fontinalis (brook trout): 129869352
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Entry
129869352 CDS
T11136
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04060
Cytokine-cytokine receptor interaction
sfon04217
Necroptosis
sfon04620
Toll-like receptor signaling pathway
sfon04621
NOD-like receptor signaling pathway
sfon04622
RIG-I-like receptor signaling pathway
sfon04623
Cytosolic DNA-sensing pathway
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129869352
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129869352
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129869352
04621 NOD-like receptor signaling pathway
129869352
04622 RIG-I-like receptor signaling pathway
129869352
04623 Cytosolic DNA-sensing pathway
129869352
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129869352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sfon04052
]
129869352
Cytokines and neuropeptides [BR:
sfon04052
]
Cytokines
Interferons
129869352
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Glyco_hydro_20
DUF3037
Motif
Other DBs
NCBI-GeneID:
129869352
NCBI-ProteinID:
XP_055799664
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Position
2:complement(80005917..80007640)
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AA seq
183 aa
AA seq
DB search
MGSISFWMCLVMTICTWNKTIGCTWMRTLPRSPSMFQVFSNNTITMLQKMGHEVSRESQI
PFPDKQYRKVNNFKADEQMAFISHTLNAIKKLYSSGKYESTAWDQKGVDKFMNDLYRQTS
ELVKAMKTSQSKSVERVNKNMSLHFKFLKNYLKREDYSASGWEDIRTVVLAHLQRLDTTL
SSQ
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaatcagcttttggatgtgcttggtcatgacgatttgcacctggaataaaacc
atcggatgcacgtggatgaggacactgcctcggtctccgagcatgttccaagtgttcagc
aacaacaccataacgatgcttcagaaaatgggtcatgaagtctctcgagaatctcagatc
cctttccctgacaaacaatacagaaaagtcaataatttcaaggctgacgaacagatggcc
ttcatttcgcatactctgaacgctataaagaaattgtacagcagtggtaaatatgagtcc
accgcctgggaccagaaaggagttgacaagtttatgaatgacctctatcgccagacctcg
gagctggtaaaggctatgaaaactagccaatcaaaatctgtcgaaagagtgaacaaaaat
atgagccttcacttcaagttcctgaagaattacttgaaacgcgaggattacagcgcaagc
ggctgggaagacataaggacagtggtgctggcacacctacaaagactagacacaacatta
agtagccaatga
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