Salvelinus fontinalis (brook trout): 129869403
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Entry
129869403 CDS
T11136
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129869403 (hps3)
Membrane trafficking [BR:
sfon04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
129869403 (hps3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129869403
NCBI-ProteinID:
XP_055799766
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Position
14:3493916..3533257
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AA seq
1070 aa
AA seq
DB search
MVHVYNCHPFASQQIVPTEQEPGLVCCGGGALFVVSAGGCKIEAFQLGEDGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNAPYLRAYTNWRYQAAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
IIHLPGLSPQQVAICAGYIALQTELEVLVVKLERLPGAAFTQKSADKKPQDHSLVPQDMI
TGAEHDNETEGRREGLAGHRDQDDFFIFPKHQELLGDRAKDCGVKVSLEWTGMESEARGN
LIITYILYRRFAPDFFQDCSVEETRLHSLQFHPVFTSNQEVCVEGGRGVEPTCLFCFFSL
PKTGYLYSVRGGVQMVSAYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCAAVAARAEDP
YIDTTMKACPPITMELCALRIQLFIGLKALCHYRHHIVLLTTADVETREDTERTARRVIE
YKDHKTLRGIFLAVGIEPSTTPALERFLAHSFLNRKSPFTKPQNPSEMGHGWNLYVVNTV
PPLQLYNEMVEYSKTYEETNPLSQSCLHLLSEAHLLLRATLLDPRVGNPVERPQTTGENL
ALGYSTARTADRQELQQAFQESCAQLGDCFSRFDKRDCHLALPYYKMSGLSLTEVISRNR
GLSNSLCGYGKGFLFFLKHSLYEETLELLTEETANEVLDIFGVAEPSQLPHVIASPSMAR
ASPDCGLAHLERLESIGAPSVPLTLSKAALALRMADLQLYRQHMDRHTEMLQVYGFIEEA
KLLLHGRGDAVVPTLLARHLKDNQDGLLVAAMVALHENDKVKLDEADLFFQELCGDVSGP
QGGPQLLVDFWEALLMASSQEAVIQELLFRLTTVYIDRVTRGDGRGFKPLKSADDLINWC
SHYGVLYPWVSILTPAHVNIIPEDLLKLQSLLCGPTLDASSILPLLEQLPDGDNAGLSVH
VLCATKLGHYESSIERLLDRCPQAIIPYANHELQNNNMALWWQKLFPELCERTRATQGED
SILLAALKETLVVVAMELNPLEFLDLLPDDGTVHFFLPHLLECSQRNLMM
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccaccctttcgcgtcccagcaaatcgtgccaaccgagcag
gaaccggggttggtgtgctgcggcgggggtgccctattcgtggtgtccgctggaggatgc
aagatcgaggcttttcaactgggtgaagatgggtgtcctctcatctgtcgcttcgccact
atggggactgtgcagagcatcctacacagtgagataggggactacctggtgaccatcgag
gagaagaacaacgccccctacctccgcgcctacaccaactggcgctaccaggcggctgag
aaaacacgcgttggcgtgcgtctgctcggtcatttcctgcgcggctcgtccatgcgcggg
gctcccaaggagcagatggagatcattgagattccactgtttgagcgtccgctgtgtgtg
gcgtgctgtggggtgaccggagacctgctggtggggtgtcctaagagcctggtgctgttc
agtctaaagagacaggccctcaacgacaagctctccatcctggactttgagcgctgtctg
atcatccacctcccgggactgtcgccccaacaggtggcgatctgtgcagggtacattgcc
ctgcagacagagctggaggtgctggtggtcaaactggagagacttcctggtgctgctttt
acccagaagtcagctgacaagaagccccaggaccacagtctggtcccccaagatatgatc
actggagcagaacacgacaacgagacggaggggaggagagagggtctggctggtcaccgt
gaccaggatgacttcttcattttccccaagcaccaagagctcctgggggacagggctaag
gactgtggggtcaaggtctctcttgagtggacaggcatggagagtgaggccaggggcaac
ctcatcatcacctatatcttatacaggcgttttgctccagacttcttccaagactgcagt
gttgaggagacccgcctgcactccctgcagtttcaccctgtgttcaccagtaaccaggaa
gtatgtgtggaggggggcagaggggtggagccgacgtgtttgttctgtttcttctcactg
cccaagacgggctatttgtacagcgtgaggggcggggttcagatggtctcagcctatcag
tatccagagaaggcccagcaggccgtcctcactgacctcttcctccacatcatcacaaag
aatgctctccagtgcttctcagtgaggtgtgcagcagtggcagccagagctgaggaccct
tacatcgataccaccatgaaggcctgtcctcccatcaccatggagttgtgtgctctgcgt
attcagctgttcattggtctgaaggctctgtgtcactaccgacaccacatcgtcctgctg
accactgcagatgtggagaccagggaggacacagagaggaccgcgcgcagagtcatagaa
tacaaagatcacaaaacccttagggggattttcctagcagtaggtatagagccttccacc
acgccggctctggagcgttttctggctcactccttccttaacaggaagtcacccttcacc
aagccccagaatcccagtgagatgggtcacggctggaacctgtacgtggtcaacaccgtc
cccccgctccagctctacaacgagatggtggagtacagcaagacgtatgaggagaccaac
cctctgtctcagagctgtctgcacctgctaagtgaagcccacctcctcctgagagccacg
ctcctggacccccgggttggaaaccctgtagaacggcctcagaccactggtgagaacctg
gccctgggatatagtacagcacgcaccgcagacagacaggagctgcagcaggccttccag
gagagctgcgcccagttaggagactgcttcagcaggtttgacaagcgggactgccacctg
gccctgccctactataagatgtcaggcctgtctctgacagaggtgatctccaggaacagg
ggtctgtctaacagtctctgtggctacgggaagggcttcctcttcttcctcaaacactcc
ctctatgaggagaccctggagctgctcactgaggagacggccaacgaggtgctggatatc
ttcggtgtggccgagccgtcccagcttccccatgttatagccagcccttccatggccaga
gccagccctgactgtggcctggcccacctagagcggctggagtccatcggagccccctcc
gtacccctcaccctgtccaaggctgccctggccctgcgcatggcagacctccagctctac
aggcaacacatggaccgacacacagagatgctgcaggtgtatgggttcattgaggaagcc
aagctgctgctgcacggcagaggggatgcggtggtacctactctcctcgctcgccacctc
aaggacaaccaggacggcctgctggtggcagccatggtggcgctgcacgagaacgacaag
gtcaaactggacgaggctgacctcttcttccaggagctgtgtggggacgtgtcagggccc
cagggaggccctcagctgctggttgacttctgggaagccttgctgatggcctcgtcacag
gaagctgtcatccaggagctgctgttccgcctcaccactgtctacatcgatcgcgtcaca
cggggagacggccgcggattcaaaccgctcaagagcgctgacgacctgatcaactggtgt
tcccactacggcgtgttgtatccctgggtcagcatcctgactccagctcacgtcaacatc
attccagaagacctcctcaaactacagtccctgctgtgcggtcccaccctggacgcgtca
tccatcctgcccctgttggagcagctgccagacggggacaacgccgggctcagtgtgcac
gtgctctgtgccaccaagctgggtcactacgagagctccatcgagaggttgctagaccgc
tgtcctcaggccatcatcccttatgctaatcatgagctgcagaacaacaacatggctctg
tggtggcagaagctgttccctgagctgtgtgagagaaccagggcgacacagggagaggac
agcatcctgctggctgctctcaaagaaacgctggtggtggttgccatggagctgaacccc
ctggagttcctggacctgttgcctgacgacgggacggtccacttcttcctgcctcacctg
ctggagtgcagccagagaaacctcatgatgtga
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