Salvelinus fontinalis (brook trout): 129869626
Help
Entry
129869626 CDS
T11136
Name
(RefSeq) platelet-derived growth factor receptor alpha-like
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
sfon04144
Endocytosis
sfon04510
Focal adhesion
sfon04540
Gap junction
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129869626
04020 Calcium signaling pathway
129869626
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129869626
09144 Cellular community - eukaryotes
04510 Focal adhesion
129869626
04540 Gap junction
129869626
09142 Cell motility
04810 Regulation of actin cytoskeleton
129869626
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfon01001
]
129869626
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sfon04090
]
129869626
Enzymes [BR:
sfon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129869626
Protein kinases [BR:
sfon01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
129869626
CD molecules [BR:
sfon04090
]
Proteins
129869626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Pkinase
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Receptor_2B4
Kinase-like
Motif
Other DBs
NCBI-GeneID:
129869626
NCBI-ProteinID:
XP_055800186
LinkDB
All DBs
Position
14:complement(22244101..22266102)
Genome browser
AA seq
1467 aa
AA seq
DB search
MDEMKTCLIIGVFLFGLLSVTRGLATPTIVSTEDEFVLEPLSVFNISCTGKRNVAWVEPL
PDDTFVLPGYYTSTLFIYNASVTHTGYYSCKYQYKEGDEEVDGVANDAFIYVFVPDPEIP
FVPEEPDRMLVPIYPNRTIIPCRVSDPQSQLVLKSAPSGVEVDAVYKNKIGFIGNLDAGL
YICETTVNGMTMMSDTYTVEANKQMENIHVEVKATEEAVRLGEPFNITCVAPPGLPYQQQ
WLHPRKQAADAVQMKQTLPDRVVYTLSIPAATSQDSGVYECSITNNVSGEIRANRVAVTV
FEENTFVMLDHSGIGVVEFVSMMEETEFTISIEAFPAPKVTWLKDGIAITENSYFLTKTS
HLEGNQHHSTLTLRQPLEEDSGNYTIMVLSIPHTAQFSFTLKVKASAPVLFQPASAPVLI
PQREEMVVPLHTPFTLTCRGEAELAWETPVYLSEQTEEDNSGLFVTTITVENATAANTGF
YTCFYNGGNSTEEGEDSSIYIYVPDPEVPFVPSLVPFGNHVLNGHDEMEIQCRVSDPSAN
VTLVNTDTQQAVPMTVYDSKRGAVGFFSAGTYVCKALINGEEHLSEEYIVHGWAGGLELR
VELKAQKTALLVGDTITVTCVARGSEILEDHWKYPGKLVNRGLKSVRENKRDQEIQYIMT
VPQASAKDSGIYACSITDIISNESQTKELVITVYESPFVSLRPVFSSQESADLDESREFR
ADIDSFPSAQVTWLKDGLPLNYVAAEITTSLQQLSETRYQSVLTLIRAKEEDSGNYTIRV
QNGNQTHSHSFSLQVKVPAVIVGLMDLHHGSASGQSVVCIAGGMPTPEVEWFICKNIKHC
ANDSSQWVPLPTNDTDIAVEAHFNQDNQLESQVIFVRLENTLAVRCLARNEMAVVSREVK
LVSQGPHSELPVTAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYV
DPMQLPYDSRWEFSHDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS
SEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPTYIITEYCFYGDLVNYLHKNRENFLS
LHSEKTKKDLDIFGINPADESSRSYVILSFESGKGDYMEMKQADTMQYVPMLEMSDASKY
SDIQRSEYDHPPSQKGDNEMDSLLSEDGNEGLSTTDLLSFTYQVARGMEFLSSKNCVHRD
LAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNMYTTLSDV
WSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHAPADVYEMMIKCWNSEPE
KRPSFLSLSESVASLLPSGYKRCFERASHEFLKSDHPAVTRVQVESEDTYIGITYKSQDK
LKDRESGFDEQRLSSDSGYIIPLPDLDPLSDDEYIKRIRHSSQTSEESAIETGSSFTLAK
REGETLEDISLLDEMCLDSELVEDSFL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatgaagacatgtctcatcattggggttttcttgtttgggttgttatcagtt
acccgcgggctggccacaccgaccattgtatcaactgaagatgagtttgttctcgagccg
ctctccgtgttcaacatcagctgcaccggtaaaaggaacgttgcttgggtcgagccccta
ccggacgacacattcgttttgcctggatattacacttccacgctcttcatttacaacgct
tctgtgacacacaccggatattactcctgcaaataccaatacaaagagggcgatgaagag
gtggatggcgtagccaatgatgcgttcatatacgttttcgtcccagatcctgagattcca
tttgtgcctgaggagccagatcgcatgctagtcccaatctatcccaatagaaccatcatc
ccatgcagggtgtcagaccctcaatcccagttggtcctaaagagcgctcccagtggagta
gaggtggacgcagtttataagaacaagatcggcttcattggcaacctggacgctggcttg
tacatctgtgagaccaccgtgaacggcatgacaatgatgagtgacacttacaccgtggag
gccaacaaacagatggagaacatccatgtggaggtgaaggccaccgaagaggcagtgaga
ctgggggaacccttcaacatcacctgtgtggcacctccaggactgccctaccagcagcag
tggctccaccccaggaaacaggctgcggatgcagtccagatgaaacagactctgcctgat
agagtggtctacaccctcagtatcccagcagccacctctcaggacagtggggtgtatgag
tgctccatcaccaacaacgtcagtggagagatcagagccaacagggtggctgtcactgtc
tttgaagagaacacctttgtgatgttggaccacagtgggattggagtggtggagtttgtc
agtatgatggaggagacagagttcaccatcagtattgaagccttccctgctcctaaagtc
acctggctgaaagacggtatcgctatcactgagaacagctacttcctcaccaagaccagc
catctggaggggaaccagcatcatagcactctgactcttcggcagccactagaggaggac
agtggtaactacaccatcatggtcctcagcatccctcacactgcccagttctccttcacc
ctcaaagtgaaagcctcagccccagtgctgttccagccagcctcagctccggtgctgatc
ccccagagagaggagatggttgttcccctccacacccccttcactctgacttgcaggggc
gaggccgagctggcctgggaaacgcctgtctacctatcagagcagacagaggaggacaac
agcggcctgttcgtcaccacgattaccgtagagaacgccactgcggcaaacactggtttc
tacacctgcttctacaacggagggaactccactgaggagggagaggacagcagcatctac
atatatgtgccagatccagaggtgccctttgtcccctctctggtgccctttggcaaccac
gtcctgaatggtcacgatgagatggaaatccagtgtcgcgtgtcggaccccagtgccaat
gtgaccctggtcaacactgatacccagcaggccgtgcccatgactgtctacgacagcaag
aggggcgccgtgggcttcttcagtgcaggaacctatgtctgcaaggccctcatcaatgga
gaggagcacctcagtgaggagtacatcgtccatggctgggcaggggggttagagctgcgt
gtggagctgaaggcccagaagactgctctcttggtgggagacaccatcactgtcacctgt
gtggcccgggggtctgagatactggaagaccactggaagtaccctggaaaactggtgaac
cgtggcttgaagtcggtgcgtgagaataagagggaccaggagatccagtacatcatgact
gtcccccaggcctcagccaaagacagcggcatctacgcctgctccattactgacatcatc
agcaatgagagccagaccaaggagctggtcatcactgtctatgagagcccatttgtgtcg
ctgcgccctgtgttcagttctcaggagtcagcagacctggatgagagcagagagttccgg
gccgacatcgactccttccccagcgcccaggtcacatggctcaaagatggcctccccctc
aactatgtggcggctgagataaccaccagcctccagcagctcagcgagaccaggtaccag
agtgttctgaccctgatccgggccaaggaggaggacagtgggaactacaccatcagagtg
cagaacgggaaccagacccacagccacagcttcagcctgcaggtcaaagtacctgcagtc
attgtgggcctgatggacctccaccatggctcagcctcaggccagtctgtagtgtgtatc
gctggaggcatgcccactcctgaagtggagtggttcatctgcaagaacataaaacactgt
gccaacgactcgtctcagtgggtgcccctgccaaccaacgacacagatatcgccgtggaa
gcgcattttaatcaggacaaccagctggagagccaggtgatcttcgtgcgtcttgagaac
actctggccgtccgctgcctggccaggaacgagatggccgtcgtcagcagggaggtgaag
ctggtgtcacaaggcccccactctgagctgcctgtaactgctgctgttttggtgctgctg
gtcattgtcatcatctcactcattgtcctggtcattatctggaaacagaagcctcgctat
gagatccgctggagggtgatagagtcagtgagccctgatggccatgagtacatctacgtg
gaccccatgcaactgccctatgactccagatgggagttttctcacgatgggctcgtactg
ggtcgtgtcctgggctctggggcgtttgggaaggtggtggagggaactgcatatggactc
agccgctcccagcctgtcatgaaggtggctgtgaagatgctgaaacccacagcccgctcc
agtgagaaacaggccctgatgtcagagctgaagatcatgactcacctgggccctcacctc
aacatcgtcaacctgctaggggcctgcaccaagtcaggccccacctacatcatcactgag
tactgcttctatggagacctggtcaactacctgcacaagaacagagagaacttcctcagc
ttgcactcagagaagaccaagaaagacctggacatctttggcataaaccctgcagacgag
agcagcaggagctatgtgatcctgtcctttgaaagtggtaaaggggactacatggagatg
aagcaggcagacaccatgcagtacgtgcccatgctggagatgagtgatgcctccaagtac
tccgacatccagaggtctgaatatgaccacccaccatcacagaagggtgataatgagatg
gacagcctgctgtcagaagacggcaacgagggcctcagcaccacagacctgctcagcttt
acctaccaggtggccagaggcatggagttcctgtcctctaagaactgtgtgcatcgtgac
ctggctgctaggaacgtcctgctctctcaggggaagatagtgaaaatctgtgactttggc
ctagccagagacatcatgcatgacaacaactatgtctccaaaggcagtaccttcctgcca
gtgaagtggatggctcctgagagtatctttgacaacatgtacaccaccctcagtgatgtc
tggtcctatggcatcctcctctgggagattttctctctaggtggcaccccatatccaggg
atggtagtggactccagcttctacaacaagatcaagagtggctacaggatggccaaacct
gagcacgcccccgctgatgtgtatgagatgatgataaagtgttggaacagtgagcctgag
aagaggccttccttcctcagcctgagtgagagtgtggcttcactgctgccttccggctac
aagaggtgcttcgagagggcaagccatgagtttctgaagagcgaccatccagcagtgacc
agggtccaggtggagagtgaagacacctacattgggatcacctataagagtcaggacaag
ttgaaggacagggagagtggcttcgacgagcagcgcctcagctctgacagcggttacatt
atccccctccctgacctggaccctctgtctgatgatgagtacatcaagaggatccgccac
agctctcagacatcggaagagagtgccatagagacaggctccagcttcacgctggccaag
agggaaggagagaccctggaggacatcagcctgttggatgagatgtgtctggactcagag
ctggtggaagacagtttcctgtga
DBGET
integrated database retrieval system
