Siminovitchia fortis: QNH23_00355
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Entry
QNH23_00355 CDS
T09068
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
sfor
Siminovitchia fortis
Pathway
sfor02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QNH23_00355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfor03000
]
QNH23_00355
Transcription factors [BR:
sfor03000
]
Prokaryotic type
Helix-turn-helix
Other families
QNH23_00355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_12
TPR_8
TPR_16
Rho_N
TPR_2
Triabin
Helicase_C_4
RPN7
Motif
Other DBs
NCBI-ProteinID:
WHY81918
LinkDB
All DBs
Position
79822..81060
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AA seq
412 aa
AA seq
DB search
MNLEKMNIGAMIKYHRQLRNMTQSELCNGICSVTHLSKFENYNKEVNQETIMLLLERLGI
SLDSIQRASETIAADLSDLLDAVLSYDKKRAEECYQRVEEQREYITFSNYIARYHLYLYR
YFLLVNDFERAVKEQETLRQILNSLSAQEKELYEYINAAFDIIKGDYKKSLDTLLKLEAN
DLLPSPWQAEMYYFIALNYANLKDNSSSVAYGHSALEAYSRTFNYLRILHTQFLLGIAYT
DLGLYENAAEQYRFIFRNMNLINTEELISTMYNNYALLLEKTGKFEEAADYYLLSMEKAQ
SQKEYLVSLCSYTELLISLGEKEKALRNISKILGETKANSMKKQELIFRYYQYLLKDHKE
KAMAFLENDVLPFLEKFFFIEDYNKYALSLAEYYLARDTDRALYYYKKIAER
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggagaaaatgaatatcggcgcaatgattaaatatcaccgccaattacgaaat
atgacgcaatctgagctgtgcaatggcatatgttccgttacacatttgagcaagtttgag
aattacaacaaagaagtgaatcaggaaactatcatgctcctgctcgagcgtttgggcatt
tcgttagactcgattcaaagagcttcggaaacgattgcagccgacctctctgatttattg
gatgctgtcctttcgtacgataagaagcgcgcagaagagtgctaccaacgtgttgaagaa
cagcgggaatacattactttctccaattacattgcacgctaccacctatacttatatcga
tattttttgctcgtcaatgactttgagagagccgtgaaggaacaggaaacactgaggcaa
attttgaattctttaagtgcccaagaaaaagagctttatgaatatatcaatgctgcattt
gatattattaaaggagattataaaaagtcactggatactttgttgaaacttgaggcaaac
gacttattgccctccccttggcaagcggaaatgtattattttattgcacttaattatgcc
aacttgaaagacaacagcagcagtgttgcttatggtcacagtgctttggaggcatactcc
aggacttttaactatttgcgtatactacatactcagtttttgttgggtatcgcatacaca
gatctgggtttatacgaaaatgctgcagagcagtatcgttttatattcaggaacatgaat
ttaatcaatacagaagaattaatttctaccatgtataacaactacgccctgttgcttgaa
aaaacgggaaaattcgaagaggccgctgattactacctcctttcaatggaaaaagcccaa
tcacagaaagaatacctggtaagcttatgcagctatactgagcttttgatctccctagga
gagaaagaaaaagcacttcggaatatttctaagattttgggggaaacaaaggctaactct
atgaaaaagcaagaattgatttttcgatattatcaatatttattaaaagaccataaagaa
aaggcaatggcatttcttgaaaacgatgtcttgccgtttttggaaaagttctttttcatt
gaagattataataaatatgctttatccttagcagaatattatttagctagagatacggat
agagcactttattattataaaaaaatagcagagaggtga
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