Siminovitchia fortis: QNH23_02250
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Entry
QNH23_02250 CDS
T09068
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sfor
Siminovitchia fortis
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfor03016
]
QNH23_02250 (thpR)
Enzymes [BR:
sfor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QNH23_02250 (thpR)
Transfer RNA biogenesis [BR:
sfor03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QNH23_02250 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
2H-SAK
Motif
Other DBs
NCBI-ProteinID:
WHY82251
LinkDB
All DBs
Position
435105..435668
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AA seq
187 aa
AA seq
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MRSTHYFFALALPDEVKAYLSEISERLKADFAFKNWVHPKDYHITLAFLGNADQQRLTES
VFHVREALKDWQSFQVRFNQIGTFGRPDLPRILWVNTTESPSLAEVRDKVYASCIHAGFE
LETRPFKPHITLARKWVGQGNFHMPAAEKSIASLLPGPAFSMEEAVLYRTHLDRTPKYEK
VESFKLI
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcaacccactatttctttgcattggcattgcctgatgaggtaaaagcatatcta
tccgaaatcagtgagcggctgaaagctgacttcgcttttaaaaactgggttcatccaaag
gattaccatattacactggcttttctgggaaatgccgatcaacagaggcttactgaaagt
gtttttcatgtaagggaagcattgaaagattggcagtcatttcaggtgaggttcaatcag
atcgggacgtttgggcgccctgatctgccaagaatattgtgggtcaatacgacagaaagc
ccttcattagcagaagtgagggataaagtctatgcctcatgcattcatgcgggctttgaa
cttgagacaaggccattcaaacctcatatcacgcttgcaagaaagtgggtggggcagggg
aacttccatatgccggcagcagaaaaaagcatcgcctccctgcttccgggcccagctttt
tcaatggaagaggcggtgctgtaccgaacacatcttgacagaacgccgaaatacgaaaaa
gtcgagtcttttaagttgatatag
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