Siminovitchia fortis: QNH23_02785
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Entry
QNH23_02785 CDS
T09068
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sfor
Siminovitchia fortis
Pathway
sfor03030
DNA replication
sfor03430
Mismatch repair
sfor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNH23_02785 (dnaE)
03430 Mismatch repair
QNH23_02785 (dnaE)
03440 Homologous recombination
QNH23_02785 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfor03032
]
QNH23_02785 (dnaE)
03400 DNA repair and recombination proteins [BR:
sfor03400
]
QNH23_02785 (dnaE)
Enzymes [BR:
sfor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QNH23_02785 (dnaE)
DNA replication proteins [BR:
sfor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QNH23_02785 (dnaE)
DNA repair and recombination proteins [BR:
sfor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QNH23_02785 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WHY82349
LinkDB
All DBs
Position
541713..545066
Genome browser
AA seq
1117 aa
AA seq
DB search
MNFVHLQIATAYSLLSSTVSISELVQEAKRKNFHALAITDHNVLYGVLSFYQTCKEAGIK
PIIGLTADVEADGNQAYPLVLLARNNTGYANLLKISSAIQIQPNKTISWKWLGSYSEGLI
AITPGIMGEIEQFLKAGDVEQAQTVSERYISTFGKDSFYLSLQNHLTDTPPGFTDTLAQF
AERIGIKTVVTNDVRYLKKEDHFAYRCLQAIRDGEKLDITDEKLYRSGEYFFKSKEAMAE
KFSEYTEALENTFRIAEECNVFIETDRHLLPKYPVPKNKTAKNMLLEQCEKGLEKRGIDD
PEYRKRLKYELEIINQMGFNDYFLIVWDFMKYTRDNSILTGPGRGSAAGSLVSYVLEITD
VDPVKHGLLFERFLNPERISMPDIDIDFPDIRRDQVIGYVAEKYGKMNVAHIITFGTFAA
KAAIRDTARVFGLSPKDIDRLSKMMPSRLGMKLESAVKESAELRDMMASSEQNRLMFETA
LKLEGLPRHTSIHAAGVVISEEPLVNIIPIKEGPDGVYVTQLPMEDLEKIGLLKMDFLGL
RNLTLLEQIVKSIKIHTGKTIRLENIPFADEKTFQLLQKGDTTGIFQLESEGMRKVLREL
KPTGFEDIVAVNALFRPGPMENIPTYIKRKHGNEKVDYPHPDLKPILDFTYGVIVYQEQI
MQIAAALSGYSLGEADLLRRAVSKKKREVLDQQRRRFVSGAVEKGYSQDTANATYDLIVR
FANYGFNRSHAVAYSFIAWQLAWLKAHYPKYFMAALLTSVIGNEDKIALYTAEAKQKGIE
ILPPSINKSHFPFLAEKEGIRFSLRAIKGLGAAAMKEIVQAREGGPFKDLFDFCLRVSPR
IINRKILESLVYAGCLDEFGQDRAVLLATLDVAIEHAELMRPSGDTPDLFIEEEMFHIKP
IYVEVEPMRLADKLAFEKETTGIFISSHPAAAFEKEFSSADAAKLIHLEPGQRNQSAGIY
LSAVKTIRTKKGDVMAFITMSDPSGEMEGVVFPDVYNRSSALLKQGGVVLVTGNVEERKG
AAQFIVQKVVSTEELKEKTGKQMKNLYVKVPAELHMPDILNKLHSILKKYPGQTGVILYY
EKENKLIKLGDENRVGPEEKCLKEISGLLGADCVKLK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
ttgaactttgttcatttgcaaatagccactgcttacagtctgctgtcaagtacggtttcc
atttctgagcttgttcaggaagcgaaaaggaaaaatttccatgctctggccattacagat
cacaatgttttatacggcgtcctgtctttctatcaaacttgcaaggaagcaggcatcaaa
ccgattatcggattgactgcggatgtggaagcggacggaaaccaagcttatcccctcgtt
ttattggccaggaacaatacaggctatgccaatcttttaaaaatatcgagcgccattcaa
atacagccgaataaaaccatttcgtggaaatggcttggatcgtacagtgaaggattgatt
gccatcaccccgggaatcatgggagaaattgagcagttcttgaaagcaggggacgtggag
caggcgcaaacagtttcggagcgttacatttccacttttggcaaagactccttctatctt
tccttgcagaatcatcttacagatacgccgcccggttttacagacacgcttgcacaattt
gcggagcggattggaataaagacggttgtgacaaacgatgtgcggtatttgaaaaaagag
gaccactttgcctacagatgtcttcaggcaatccgtgatggggaaaaactggatatcacc
gatgaaaaattatacaggtccggagaatatttttttaaaagcaaggaagccatggcagaa
aagttttccgagtataccgaagcccttgaaaatacttttcggattgccgaagaatgcaac
gtctttattgaaacggacaggcatctgcttccgaagtatcccgttcccaaaaacaagaca
gcgaaaaatatgctgcttgaacagtgtgaaaaaggattggagaaaaggggaatcgatgat
cccgaatatcggaaaaggctgaaatatgagctggaaatcatcaatcaaatggggtttaat
gactattttctcattgtatgggactttatgaagtatacgagggataacagtattctgaca
gggccgggccgcggttcggccgccggttcgcttgtttcctatgtactggaaatcactgat
gtcgatccggtcaagcatgggttattgtttgaaagatttctgaatcccgaaagaatctca
atgccggacatcgatatcgacttcccggatatacgccgtgatcaggtaatcggatatgta
gctgaaaaatatggaaaaatgaatgtcgcgcatattattacattcgggacttttgcggcg
aaagcggctatccgcgatacggcaagggtttttggtttaagcccgaaagacatcgaccgg
ctttcgaaaatgatgccttcccgtcttggaatgaaattggagagtgctgtcaaggagtcg
gccgaattgcgggacatgatggcatcctctgagcaaaaccgcctgatgtttgagacggct
ttaaagctggaggggcttccgagacatacctctattcatgctgcaggggtagtcattagc
gaagaaccgctcgtgaatatcattccgatcaaagaaggcccggacggggtgtatgtgaca
cagcttccgatggaggaccttgagaaaatcggcctgctgaaaatggactttttaggtctt
cgcaatctgacgcttttggagcagattgtcaaaagcattaaaattcatacaggaaaaaca
attcgtttggaaaatatcccgtttgcggatgaaaaaacatttcagttgctgcaaaaaggt
gatacgaccggaattttccaactggaatccgaagggatgagaaaggttctgagggaactt
aagccgacggggtttgaggatattgttgctgtcaatgctcttttcaggccgggaccgatg
gaaaacatcccaacatatatcaaaagaaaacacggcaatgagaaggtagactatccccat
ccagacttgaagccgatattggatttcacttatggagtcattgtctatcaagagcagatc
atgcaaatagctgcggccctttccggctattcccttggggaagccgaccttctcagaagg
gcagtgagcaagaagaagagggaggttcttgatcagcagagaaggcggttcgtttcaggt
gcagttgaaaaaggatatagccaggataccgcaaatgctacatacgacttgattgtccgc
tttgcaaactatgggttcaaccggagccacgcggtggcatatagttttatagcttggcag
ctggcctggctgaaggcccattatccaaaatatttcatggcagcactcctgacgtcagta
ataggcaatgaagacaagattgccctttatacagctgaagccaagcagaaagggatagaa
atcctgccaccgtccatcaataagagccatttccctttcctggctgaaaaggaggggatc
cgtttcagccttagggcgatcaaaggccttggagcagctgcaatgaaagaaattgtccag
gcacgggaaggcggaccctttaaagatctgttcgatttttgcctaagggtatctccaagg
attattaacagaaaaatacttgagtctcttgtgtatgccggatgcttggatgagtttgga
caggacagggctgtcttgcttgcgacccttgatgtggcaattgagcacgctgaactgatg
aggccatcaggagatacgccggatcttttcatcgaagaagagatgttccatataaaaccg
atatacgtcgaggttgagccgatgcgcttggctgataagctggcatttgaaaaggaaacg
acaggcatttttatatcaagccacccggcagccgcatttgaaaaagaattttcatcagcc
gatgccgccaaactgattcacctggaaccgggccaaagaaatcaatcggccggaatatac
ttatccgcagtaaaaacaatccgtacaaaaaaaggcgacgtaatggcattcattacgatg
agcgatccttcgggcgaaatggaaggcgtcgtttttccggatgtatacaaccgcagcagc
gcattgctgaagcaggggggggttgttcttgtcaccgggaatgtggaagaacggaagggc
gccgctcaatttatcgttcaaaaggttgtttcaactgaagaattgaaagaaaaaaccggc
aaacaaatgaagaacttatatgtgaaagttccggcagaattgcacatgcctgatatatta
aataaactgcactccattttaaaaaaatatccgggacaaacaggggttattctttattat
gagaaagaaaataaactgataaagctgggggatgaaaaccgtgtcggacctgaagaaaaa
tgtctcaaggagatcagcgggcttcttggagcagattgtgtaaagttaaaataa
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