Siminovitchia fortis: QNH23_04410
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Entry
QNH23_04410 CDS
T09068
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sfor
Siminovitchia fortis
Pathway
sfor03410
Base excision repair
sfor03430
Mismatch repair
sfor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNH23_04410 (recJ)
03430 Mismatch repair
QNH23_04410 (recJ)
03440 Homologous recombination
QNH23_04410 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfor03400
]
QNH23_04410 (recJ)
DNA repair and recombination proteins [BR:
sfor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QNH23_04410 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QNH23_04410 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QNH23_04410 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
WHY82635
LinkDB
All DBs
Position
866859..869222
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AA seq
787 aa
AA seq
DB search
MLQPNTRWIVRKTDEKAVQILTDELDISPLTATLLVNRGISDPAEAYRFLHIEKEDFHDP
FLLQDMKKAVERIRQAIKEQEKILVYGDYDADGVTSTAVLMTALRELGAPAEFYIPNRFT
EGYGPNENAFRRAADNGVKLIITVDTGIASVHEAEVAKQLGLDLIITDHHEIRPEIPPAY
AIIHPRFGGTHYPFPDLAGVGVTFKLAHALYGTAPEQLLDLVAVGTIADLVPLHGENRLI
VKKGLRVLSRSERPGLVALSKLAGVNLAEANEETVGFTIGPRLNAAGRLYSADPAAELLL
SKDDRTAEMLARDIEQLNSERKDIVAEITKEAVEMVETLYPPSENHVLVIGKEGWNPGVI
GIVASRLTEKFYRPAIVLGYDKETGKAKGSARSIKGFDLFANLLSCSDLLEHFGGHPMAA
GMTLSISNVEELRSRLNVAARDQLSEKDLVPFTDLDAEASLSEVDIHSIKELDMLAPYGV
GNPKPKFMISGADPQDIRKIGTDQNHLKLTLKQAGGLLDGIGFNLGYLADSISPDAQLSV
IGELAINEWNNMRKPQIFIRDASISNWQLFDMRGKRRPDSWLPLLPKKNVYFIVFRRQTL
DEFSLDASQVKFISDYEAAKELAIDGKSVVFLDIPPNLSLLENLIEGKAPDRIYAHFSHD
QGQFFRTIPTREHFKWYYAFLAKRRTFDVRKYGKELETYRGWSEETVRFMTKVFFELEFV
TIKDGMIVLNQVKMKKDLSDSPAYQQKQADIELENALIYSSYQELRQWFEKRVAHSGYHE
EEVDAWT
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgttacagccaaatacccgctggatcgttcggaaaaccgatgagaaagcggttcaaata
ctaactgatgaacttgatatatctccgctgacagccacattgcttgtgaacagggggatt
agcgatcctgctgaagcttatcgatttttacatattgaaaaagaagactttcatgatccg
tttttgctgcaagacatgaaaaaagcggttgagcggatccgtcaggcaatcaaggaacag
gagaaaattcttgtatacggcgattatgatgccgacggtgtaacgagcaccgccgtctta
atgacagcattaagggaattgggggctccagccgagttttacataccgaatcgttttaca
gaaggatatggcccgaatgaaaatgcttttcgccgggccgccgataatggcgtcaagctg
attataaccgttgataccggtatagcatctgtccatgaggcagaagtcgcaaaacagctt
ggattggatttgattataacggatcaccatgagatcaggcctgaaataccgccggcatat
gccatcatacatccaaggtttggcggcacacattatccgtttcccgatcttgcgggagtc
ggtgtcactttcaagcttgcccatgccctatacgggactgcgccggaacagctgctcgac
ctcgtcgctgtcggaacgattgccgacctggtaccgctgcatggggagaaccggctcatt
gtcaaaaaaggccttcgggtcctcagccgttcggagcgccccggacttgttgcattgagc
aagctggccggggtaaatcttgctgaagccaatgaagaaaccgtcggtttcacaatcggc
ccccgcctgaatgcggcgggcaggctgtattctgcagaccctgccgccgaactcttgctg
tcaaaagatgatcggacggcagaaatgctggcccgcgatattgaacaattaaacagcgag
agaaaagacatcgttgcggaaataacaaaagaagccgtagaaatggtggaaacactttac
cccccttccgaaaatcacgtgcttgtcatcggaaaagaaggatggaatccaggggtgatc
ggcatcgtggcttcaaggcttactgaaaagttctacaggccggccatcgtcttgggctat
gacaaggagacgggaaaggccaagggctctgcacgaagcatcaaaggctttgatttgttt
gccaatctgctgtcctgctctgatttgcttgagcatttcggcgggcatccgatggcggcg
ggaatgactctctcaatctccaatgtggaagagcttcgaagcagattgaatgttgcggca
agagatcagctgagtgagaaggatttggttccattcacggatcttgatgcggaagcttca
ttatctgaagtggatatacactcaataaaagaactggacatgcttgcaccatacggggtg
ggcaatccgaaaccgaaatttatgatcagcggcgcagacccgcaggatattagaaaaatc
gggactgatcaaaatcacctgaagctgactttaaagcaggccggcggcttgctggatgga
atcggctttaatctcggatatcttgcagacagcatctcacctgacgcacagctgtcagtc
atcggagaactggcaatcaatgaatggaataatatgaggaaaccgcaaatatttataaga
gatgccagtatcagcaactggcagctgtttgacatgcgcggcaaaaggcgccctgatagc
tggcttccccttttaccgaaaaagaacgtgtatttcatcgtttttagacggcaaacgttg
gatgagttttcgctggatgcctcacaagttaaattcatttctgattacgaagcggccaaa
gaactggccattgatggaaaaagtgttgtgtttcttgatatccctcctaatctaagtctt
cttgaaaatttgatagaagggaaggcgccagatcggatatatgctcatttttcccatgat
caggggcaattttttagaacgatcccgactagggagcattttaaatggtactatgctttc
cttgcgaaaaggcggacctttgatgtaagaaagtacggaaaagagcttgaaacctatcgc
ggttggtcagaagaaaccgtccggtttatgaccaaagtgttttttgagctggaatttgtt
acaataaaagatggaatgatcgtacttaaccaggtgaaaatgaagaaagatttgtcggat
tcccctgcctatcaacagaagcaggcggacattgaacttgaaaatgctctgatctattca
tcatatcaggaattgaggcaatggtttgagaagcgggttgcacactctggttatcatgag
gaggaagtggatgcatggacttaa
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