Siminovitchia fortis: QNH23_04515
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Entry
QNH23_04515 CDS
T09068
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sfor
Siminovitchia fortis
Pathway
sfor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QNH23_04515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfor03400
]
QNH23_04515
Enzymes [BR:
sfor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QNH23_04515
DNA repair and recombination proteins [BR:
sfor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QNH23_04515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
HHH_5
AAA_12
UvrD-helicase
UvrD_C
AAA_5
AAA_16
AAA
AAA_28
nSTAND3
NPHP3_N
T2SSE
DEAD
AAA_17
HHH
NTPase_1
TsaE
Motif
Other DBs
NCBI-ProteinID:
WHY82655
LinkDB
All DBs
Position
887136..889529
Genome browser
AA seq
797 aa
AA seq
DB search
MESLDLFSENEKFMKGRHLATIFHNEQNLYSVVRIRVEETNEEYKEKEAVITGYFPKIHE
QETYIFYGGLKEHPKFGLQFHANHFKKEIPQTKQGLVMYLSSDLFKGIGEKTAERIVEAL
GENAISIILSKPSVLDEIPRVSPEAAKNLYEALLEHQGLEQVMIGLNQYGFGPQLSMKIY
QVYKEDTLAIIEKNPYQLIEDVEGVGFGRADELGVQLGIVGNHPDRIKAGCLYVLDQQCM
QNGHVYLEAEQLLEQVKQLLESSQAVEIPFQIIADALVQLKEEGKIIGEEQRIYMPSLYF
SEKGLVANIRRIMEQKQYADQFPESEFLLALGNLEERLGVQYAPSQKEAIQTALTSPLMI
LTGGPGTGKTTVIKGIVELYAELHGCSLDPHAYKKEDIFPFILAAPTGRAAKRMAESTGL
PAMTIHRLLGMTGQESLDTEGEREIEGKIIIIDEMSMVDTWLAHQLFKSLPDSIQVILVG
DEDQLPSVGPGQVLKDLLASNTLPVVQLTDIYRQADGSSIVELAHKIKNGKIPSDVTAQR
KDRSFIKCQAPQIGGAVEQVVKNALTKGYTAKDIQVLAPMYRGPAGIDNLNKILQEVFNP
KKEKWNKEITLGETKFRIGDKVLQLVNQPEKNVFNGDIGEIISILYAKENVEKQDMIIVS
FEGTEVTYMRQDFNQITHAFCCSIHKAQGSEFPIVILPVVRNYYRMLRRNLLYTAITRSK
QFLILCGEESAFRVGIEREDDQKRQTTLREKLAGEKQQPVIEEKMNEEQEELSYEDKLFL
ADPMIGMENVSPYDFLD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgcttgatttgttttccgaaaatgaaaagttcatgaagggccggcacctcgcc
acgattttccataatgaacaaaacctgtactctgtcgtcaggatcagagtggaagagaca
aacgaggagtataaggaaaaagaagcggtcatcaccggttattttccaaaaatacacgaa
caggaaacgtatattttttacggcggtttaaaggaacatccgaaatttggcctccaattt
catgcgaaccatttcaaaaaggaaattccgcagacaaaacaagggcttgtcatgtaccta
tccagtgatttattcaaaggcatcggtgaaaaaacggccgaaagaatcgtagaagctctc
ggagagaatgccatcagcatcattttgagcaagccgtcggtcctggatgaaattccgcgg
gtttctccggaagcagccaaaaatctgtatgaagcactgcttgaacaccaaggactggaa
caggtcatgatcggcctgaatcaatacggattcgggccgcaactatccatgaagatttac
caggtgtacaaagaagatacattagccataattgaaaagaatccgtaccagcttatagaa
gatgtagaaggtgtcggtttcggcagggctgatgagctgggagtccagcttggcatcgtc
gggaatcatccggacagaatcaaggccggatgcctgtatgttcttgaccagcaatgcatg
caaaacggacatgtctatttagaggcggagcagctgcttgaacaggtgaaacagctgctt
gaaagcagccaggcggttgaaattcctttccaaattattgctgatgcccttgtccagtta
aaagaagaaggaaaaataattggtgaggaacagcgtatttacatgccatctctttatttt
tcagagaaaggccttgttgcgaacatccggcggattatggaacaaaaacagtatgctgat
caatttccggaatccgagtttttattggcgcttgggaatctggaagagcggttgggcgtc
cagtatgcaccatcccagaaagaagcgattcaaacagccttgacgagtcctttaatgata
ctgacaggcggacccggaaccggaaaaacaacggtcattaagggaattgtcgaactgtat
gccgagcttcacggctgttcgctcgatcctcacgcatataaaaaagaagatatatttccg
tttattttggctgcaccgacaggacgtgccgcaaaaagaatggcggaatcgaccgggctt
cctgccatgaccattcacaggctgttgggcatgacaggtcaggagagcctggatacagaa
ggcgaacgtgaaatcgaaggaaagatcatcattatcgacgaaatgtcgatggtggataca
tggcttgcccatcagcttttcaagtcactccccgattcgatccaggtcattttggtggga
gatgaagaccagcttccttcagttggtcccgggcaagtgctgaaagatcttttggcctct
aatactcttccggttgtccaattaacagacatttatcggcaggcggacggttcgtcgatt
gtggaactggcacacaaaataaagaacggaaagatcccttccgatgttacggctcagcgg
aaagaccggtcttttatcaaatgccaggcaccgcaaatagggggtgctgttgagcaggtt
gtaaaaaatgctctaacaaaaggatacacggccaaggatattcaggtattagcccccatg
taccgcgggcccgccggaatcgacaacctgaataaaatattgcaggaagtttttaatccc
aaaaaagaaaaatggaataaggaaatcacattgggagagacaaaattcaggattggggac
aaagtgctgcagctcgtcaaccagccggaaaaaaatgtcttcaatggggatatcggtgaa
atcatttccatattgtatgcaaaagaaaacgtcgaaaagcaggacatgatcattgtctct
tttgaaggtacggaagtcacatacatgcgccaggattttaaccagattacccatgctttt
tgctgttccatccataaggcgcaaggaagcgaatttccgatcgtcatccttccggttgtg
aggaattattatcggatgctgcgccgcaatttattatatacagccatcacaaggagcaag
cagtttctcattttgtgcggagaagaaagtgctttccgggtcgggatagaacgtgaagat
gatcaaaaaaggcaaactacactgcgtgagaaactggctggtgaaaagcaacagccggtc
atagaagaaaaaatgaatgaggagcaagaggaattgtcatatgaagataaacttttcttg
gcagaccccatgattggcatggaaaatgtttcaccttatgatttcctcgattga
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