Siminovitchia fortis: QNH23_04680
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Entry
QNH23_04680 CDS
T09068
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sfor
Siminovitchia fortis
Pathway
sfor03030
DNA replication
sfor03430
Mismatch repair
sfor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNH23_04680 (holA)
03430 Mismatch repair
QNH23_04680 (holA)
03440 Homologous recombination
QNH23_04680 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfor03032
]
QNH23_04680 (holA)
03400 DNA repair and recombination proteins [BR:
sfor03400
]
QNH23_04680 (holA)
Enzymes [BR:
sfor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QNH23_04680 (holA)
DNA replication proteins [BR:
sfor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QNH23_04680 (holA)
DNA repair and recombination proteins [BR:
sfor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QNH23_04680 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF1848
Patched
Motif
Other DBs
NCBI-ProteinID:
WHY82686
LinkDB
All DBs
Position
917404..918420
Genome browser
AA seq
338 aa
AA seq
DB search
MSIMKNIRNKTFSPIYLLYGKESFLINDVKQKLMANVLTNGSEEFNYSAYDLEEVPVELA
IEDAETYPFLGEKKLVIVHNPVFLTAVKQKEKVEHDLKRLEKYVSDPAQYTVMVFIADYE
KLDERKKITKLLKKQAEILEAKPLNEPQLKNWIRERAAFHHAEIEEPAVDTLVFMTGNDL
MALNEELIKLSLNAGEKGLITEEMVKRLVSRSLEQNVFALTESVVKRESGEALRIYFDLM
KQNEEPIKILSLIAGQFRLIYQVKELTGRGYSHKHAAGLLKVHPYRVKLAAGQARSFSNE
ELKAIIDLIAECDLKLKSGGLDRSVAVELLLMKIMQEK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagtataatgaaaaacattagaaacaaaacattttcgccaatatacttattatacgga
aaagaatcctttttaatcaatgacgttaaacaaaaactgatggcgaacgtgttaacgaat
ggcagtgaagaatttaattattcagcctatgatcttgaagaagtaccggtggagcttgca
atagaagatgcggagacttacccatttttaggtgaaaaaaaactggttatcgtacataat
cctgtttttttgactgctgtgaagcaaaaggaaaaggtggagcatgatctgaaaaggctg
gagaaatatgtaagcgaccccgcccaatatacagtaatggttttcattgccgattacgaa
aagctggatgagaggaaaaaaatcactaaacttctcaagaagcaggcggaaattttggag
gccaagccgctgaacgagccccagttaaaaaattggatcagggaacgtgctgctttccat
catgccgaaatagaggaaccggctgtcgatacattagttttcatgacaggcaatgacttg
atggcccttaatgaagaactgataaagctgtctctgaatgcaggcgaaaaaggcttgata
accgaagaaatggtcaaaaggcttgtctcacgatctttggaacagaatgtatttgctttg
acagagagcgtcgtcaagagggaaagtggtgaggcccttcgcatctattttgacctgatg
aagcaaaacgaggagccgattaaaatactctcccttattgccggacagttcaggcttata
tatcaggtgaaggaattgacaggccggggatacagccataaacatgccgccggcttgctg
aaagtgcatccttaccgggtaaaattggcagcaggccaagcccgttctttttcaaacgaa
gaactgaaggcaatcatcgatttgattgcggaatgcgacctgaaattaaaaagtggagga
ctggatcgatccgttgcggtggaattgctgttgatgaagatcatgcaagaaaaatag
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