Siminovitchia fortis: QNH23_08085
Help
Entry
QNH23_08085 CDS
T09068
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfor
Siminovitchia fortis
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfor03032
]
QNH23_08085 (topA)
03400 DNA repair and recombination proteins [BR:
sfor03400
]
QNH23_08085 (topA)
Enzymes [BR:
sfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QNH23_08085 (topA)
DNA replication proteins [BR:
sfor03032
]
Prokaryotic type
DNA Topoisomerases
QNH23_08085 (topA)
DNA repair and recombination proteins [BR:
sfor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QNH23_08085 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
SAND
Motif
Other DBs
NCBI-ProteinID:
WHY83316
LinkDB
All DBs
Position
complement(1553789..1555864)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVRASMGHVRDLPKSQMGVDVENNYEPKYITIRGK
GPVLKELRSAAKKAKKVYLAADPDREGEAIAWHLAHSLDVDINSDCRVIFNEITKDAIKE
SFKHPRPINKDLVDAQQARRILDRLVGYNISPLFWKKVKKGLSAGRVQSVAVRLIIDREN
EIKNFVPEEYWSIEGLFKKGKDEFQAAFYGIEGKKKKLQSEGDVKEVLGQLDGDSFVVQA
VTKKERKRNPARPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRVSDIAVKEASEYISSRFGKEYLAAGGRKDKKQANAQDAHEAIRPTSTMREPNAVK
AHLSRDQLRLYRLIWERFVASQMAPAVMDTMTVDLVNGKVTFRANGSKTKFPGFMKVYVE
GTDDQSEEKENVLPSFEEGEKVVSEKLNPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVALDNKRFIPTELGEIVTELMMEFFPEVLDVEFTARMENNLDEIEEGH
AQWVKIIDDFYQNFEKSLKKAEAEMREVEIKDEYAGEDCENCGSPMVIKMGRFGKFMACS
NFPDCRNTKPIVKEIGVKCPKCKEGNVIERKSKKKRIFYGCDRYPECDFLSWDKPINRPC
PKCDGLLVEKKLKKGNQVQCVNCDYKEEPQQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattacttggtgattgtggaatcgcctgcaaaggcgaagaccattgaacgatat
ttaggaaaaaaatataaagtaagggcatccatgggacacgtcagggatttgccgaaaagc
caaatgggtgtggatgttgaaaacaattatgaaccgaaatatataacaatcaggggaaaa
ggccctgttttaaaagaactgagatctgcagccaagaaagcgaaaaaagtatatcttgca
gctgaccccgacagggaaggtgaagcgattgcatggcatttggcccatagtcttgatgtg
gatatcaattcagactgccgtgtcatcttcaatgaaattacaaaagatgctattaaagaa
tcctttaagcatcctcgtcctataaacaaagatcttgttgatgcccaacaggcaagaaga
atattagacagactcgtagggtataacatcagcccgcttttttggaaaaaggtaaaaaag
ggtttaagcgccggaagggttcagtctgttgcagtgcgtctgatcatagacagagaaaat
gagatcaaaaatttcgttcccgaagaatattggtctatcgaaggactgtttaaaaaaggg
aaggacgaattccaggctgctttttatggaatagaaggaaagaaaaagaagcttcagtct
gaaggagatgtaaaagaggtactcgggcaattggatggtgattcctttgtggttcaggct
gttacgaaaaaagaaagaaaaagaaaccctgcccgtccgtttactacatcatcacttcag
caggaagctgccagaaagctcaatttcagagcgaaaaaaaccatgatgcttgcacagcaa
ttatatgaagggattgacctcggaaaagaaggaaccgttggtttaattacttatatgagg
acggattccacaagagtttctgatattgccgtaaaagaagcatctgaatatataagctcc
cgatttggaaaggaatatctggctgcaggaggccggaaggataagaaacaggcgaacgcc
caggacgcgcatgaagcgatccggccaactagtacaatgagggaaccgaatgctgtcaaa
gcccatttaagccgcgatcagctaagattgtacaggctgatttgggaacgttttgttgca
agccaaatggcaccggcggtcatggatacgatgactgttgatctggtgaatggtaaagtt
acatttcgtgcgaatggttccaaaacaaaattccccggctttatgaaggtatacgtggaa
ggaaccgatgatcaatcagaagaaaaagagaatgtgctgccttctttcgaagagggtgag
aaagtcgtttcggaaaagctgaacccgaaacagcattttacacagccgcctccgagatat
acagaagcaagattggtcaaaaccctggaagaattgggaataggcaggccttcgacctac
gctcctacgctcgatacgattcagcgaagaggttatgtcgctttggataataagcgtttt
atccccacagagctgggcgaaattgttacagagctgatgatggagtttttccctgaggta
ctggatgtggagtttacagccagaatggaaaataacctggatgaaattgaagagggccat
gctcagtgggttaagattatagatgacttttaccaaaacttcgaaaagagtttgaaaaaa
gcagaagctgaaatgagagaagtggaaatcaaggatgaatacgccggggaagactgcgag
aactgcggaagtcctatggttatcaaaatggggcgattcggcaaatttatggcatgcagc
aatttccctgactgcagaaacacaaagccgattgtgaaggaaatcggtgtgaaatgcccg
aaatgtaaagaaggaaatgtcatagagcgaaaaagcaagaaaaagcgcattttttatggc
tgtgaccgctatcccgaatgcgacttcctctcctgggataagccgattaaccgtccttgc
ccgaaatgcgacggacttcttgttgaaaagaagctcaaaaaaggaaatcaggtccagtgt
gtcaattgcgactacaaggaagagccgcagcaataa
DBGET
integrated database retrieval system
