Siminovitchia fortis: QNH23_09655
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Entry
QNH23_09655 CDS
T09068
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sfor
Siminovitchia fortis
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfor03400
]
QNH23_09655 (addB)
Enzymes [BR:
sfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNH23_09655 (addB)
DNA repair and recombination proteins [BR:
sfor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QNH23_09655 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
WHY83601
LinkDB
All DBs
Position
complement(1865439..1868933)
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AA seq
1164 aa
AA seq
DB search
MSLRFVIGRTGTGKTTLIQDEIRKKLAEQPDGPPILYIVPEQMTFLSEYELVQSKGLAGM
IRAQVYSFTRLAWRIFQETGGASRNHVTSTGLNMLIKKIIEEHKNELKLFRQASDKTGFI
QEVEQIFTEFKHYCVKPEDLAQKREEVGFFQSQKALADKMHDLELIYRHYEDALSGKYLD
SNDYLRLLAESIDKSRFLKNAEVYIDGFHSFTPQEYLVIERLLTVCSRVSVSLMLDRPFK
SETPDELYLFRMTGETYENLYELASQGGIAVEDDVILRETFKFKHDSLKFLESRHADRPA
GQYSGRPAVRLMQSVNRRAEIEGIAREIRRLVMEEGYRYKDIAVLMRNGNQYQGEMETIF
YDYDIPYFIDQKRSMLNHPLVELIRSVLEVISSNWRYEHVFRAIKTDLLFPTEGDLNSLR
EQMDRLENYVLAYGIKGNGWTKKDRWTYRRFRGLELDSMVQTDEEKEIEKELAVSRDIVA
LPILRLARRLKKAETGRELCEAVYFFLEELEIPRKLELLSEDAEEKGQLVASREHDQAWN
GVMELLDQFVEILGDTKMTLEDFIPVINAGLEEMKFSLIPPAIDQVFVANLEQSRLSHVK
VSFVAGLNDGVLPAKFSEGGVFSDEDRASLMDAGMNIAPDSRRRLLNEEFVAYRAFTSAE
EQLLLSWSLADDEGKALQPSPYIERIKGMFPEIVETTAVNDPAELSGDDQFEYISHPDSA
AAYLTGQLNLKKRNYPVEPFWWDVYNFYMSDPLWKRKADRILSSLFFKNGTKKLSEDTSK
DLYGESITASVSRMELFNSCPFSHFALHGLKLRDREIFRLEAPHIGDLFHAALKWISDQV
NKNNLKWANLTKKQCEQLAMEAVAFLAPKLQNHILLSSNRYNYIKRKLEQVIGRASYAMS
GHAKESGFSPVGLELAFGPKQQLPPLAFTLKNGMKMELQGRIDRVDKAENDNGIYLRVID
YKSSARELDLSEIYYGLSLQMLTYLDIIITYSKQLIGKEAFPAGVFYFHLHNPMIQTDKI
MTLSEIEEEIFKKFRMKGLVLEDPELVRLMDFSLETGESNIISAGIKKDGTLSARSKSAT
KEELGLLRRHVRSLYQQSGNGIISGKVDIDPYRMKDKTPCKFCLYKPVCQFDPALPENEF
RLIQPEKRETVITRIREEGEELEN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcactacgctttgtcattggccgtacaggaacgggaaaaacaactttaatccaggat
gaaatcagaaaaaagctggcagagcagcctgatggccctccgatcctgtatatcgtcccg
gagcaaatgacttttttatctgaatatgaattggtccaatcaaagggccttgcgggaatg
atccgtgcacaggtatacagctttacccggcttgcatggcgcatttttcaggaaaccggc
ggagcaagccgaaaccatgtgaccagcaccggactgaatatgctcataaaaaaaataatt
gaagaacataaaaatgagttgaagctgttcaggcaggcgtccgataaaacaggattcatt
caggaagttgaacagatatttacggagttcaaacattactgcgtcaagccggaagatctc
gcccaaaagagggaagaagtgggctttttccaatctcaaaaagcgcttgctgacaagatg
catgaccttgaattgatctacaggcattatgaagatgccctatcgggaaaatatctggat
tcaaacgattacctgcgcctgctggcggagtcgattgataaatcccgttttctgaaaaat
gccgaagtgtatatagatggatttcatagtttcacaccccaggaatatttggttatcgaa
cgccttttgactgtttgcagccgtgtatctgtgtcccttatgctcgaccgtccattcaaa
agtgaaacgcctgatgaactatatttattcaggatgacgggagaaacatatgaaaattta
tatgaactggcatcccagggggggatagcagtcgaagatgatgtgatccttagggaaact
tttaaatttaaacatgacagcctgaaattcctggaatcgcggcatgccgacaggccggcg
ggccagtattccggcaggcctgccgtcaggctgatgcagtccgtcaacaggcgtgcggaa
atcgaagggattgcaagggaaatacggcgtctcgtcatggaggaaggctaccggtacaag
gatatcgcggtgttgatgcgaaacgggaatcaatatcagggtgaaatggaaacgatcttt
tatgattatgatattccttacttcatcgaccaaaagcgctccatgcttaaccatccgctt
gttgaacttattcgatccgtactggaagtgatcagcagcaattggagatatgagcacgtg
ttccgtgccataaaaaccgacctgctttttccgacggaaggtgatttgaacagtcttcgg
gagcagatggacaggcttgaaaactatgtcctggcctatgggatcaaaggaaatggctgg
acgaaaaaagacagatggacataccgccgtttccgcggattagaattggacagcatggtg
cagacggatgaagaaaaggaaattgaaaaggagcttgctgtatcaagggatattgtcgcc
ctgcccatcctcaggcttgcaaggcgcctgaaaaaagctgaaacaggacgggaactgtgc
gaagccgtctatttctttttggaggagcttgaaattccccggaaactggaactgctcagt
gaagatgcagaagaaaaaggacagcttgttgcatcaagagaacatgaccaggcttggaat
ggggtaatggaactgctcgaccagtttgtggaaatactcggggatacaaaaatgacattg
gaagatttcatcccggtgattaacgccggcctggaagagatgaagttctccctcattccg
ccggcaattgatcaagtttttgtggcaaaccttgagcagtctcgcctttcacacgttaag
gtttcattcgtcgccgggctgaatgatggcgtccttcccgccaagttcagcgaaggggga
gtattttcggatgaagaccgggcatcgctgatggatgccggcatgaatatcgcccctgac
agcagaagaagacttctcaatgaggagttcgtcgcctacagggcatttacttcggcggag
gagcaattgctgctttcctggtctctggcggatgatgagggaaaagctctccagccatca
ccgtatattgaaagaataaaaggaatgtttcctgagatagttgaaacaactgccgtgaat
gatccggcagagttaagcggcgatgatcaatttgaatacatctcccaccctgattcggca
gcggcctatttgacgggtcaattgaacctaaagaaaagaaattatcctgttgagccgttt
tggtgggatgtctacaacttttacatgtccgacccgctttggaaaagaaaggctgatagg
atcctgtcgagcctgttctttaagaatgggacgaaaaagctctccgaagatacaagcaaa
gacctgtatggggaaagcattaccgcaagtgtatcgagaatggagctttttaacagctgc
cctttctcccactttgcattgcacggcttaaagctccgcgaccgtgaaatttttaggctt
gaagcgccgcatatcggtgacttattccatgccgccttgaagtggatttcagaccaggtg
aacaaaaacaacttgaagtgggcaaacctgacgaaaaaacaatgtgaacaactggccatg
gaagccgttgcgtttttggcgcccaaacttcaaaatcacattctgttaagctccaaccgc
tataactatattaaaagaaagcttgaacaggtgattggaagggcatcttatgcaatgagc
gggcatgcgaaggaaagcggcttttcacctgtcggattagagctggcctttggtccgaaa
cagcagcttccgcctttggccttcacattgaaaaatggaatgaagatggaactgcagggc
cggattgaccgcgtggataaagcggagaatgacaatgggatttatttgcgggtcattgac
tataaatccagtgcaagagagctggatctgagtgaaatctattacgggctttcattgcag
atgctgacgtatttggacattatcatcacttattcaaagcaattgatcggaaaagaagca
tttccagcgggcgtattttatttccatctgcataacccgatgatccagactgataaaatc
atgacattatctgaaatagaggaagaaatattcaagaagttcaggatgaaaggactggtc
ctggaagatccagagctcgtccgcctgatggatttttccttggagacaggcgaatccaat
atcatttcggcggggataaaaaaagacggtacgctcagtgcgagatcgaaatccgcaacg
aaggaagagcttggattgctgaggcgccatgtgcgctccctttatcagcagtcggggaat
ggaatcatatcggggaaagtggacatagacccatatcggatgaaggataaaacgccgtgt
aaattttgtctgtacaaaccggtgtgccagtttgacccggctctgccggaaaatgaattc
cggctgatccagccggagaagcgggaaactgtcatcacacgtatccgggaagaaggtgaa
gaacttgaaaactga
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