Siminovitchia fortis: QNH23_13635
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Entry
QNH23_13635 CDS
T09068
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
sfor
Siminovitchia fortis
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfor03021
]
QNH23_13635 (sigB)
Transcription machinery [BR:
sfor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QNH23_13635 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
GerE
IF2_N
DUF1492
HNF-1_N
HTH_37
NirdL-like_HTH
PhyR_sigma-like
Sigma70_ECF
HTH_28
SieB
DUF134
UPF0122
Motif
Other DBs
NCBI-ProteinID:
WHY80936
LinkDB
All DBs
Position
complement(2693719..2694513)
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AA seq
264 aa
AA seq
DB search
MPKKSQPDYKNTDVNKLIKAFQLHEDEEAQNELVLHYKNLVDSIARKYSKGKSYHEDIFQ
VGIIGLLGAIRRYDESYGKSFEAFAIPTVIGEIKRFLRDKTWSVHVPRRIKELGPKIKTT
VEDLTRELQRSPQIHEIADRLDVTEEEVLEAMEMGKSYQALSVDHSIEADSDGSTVTLLD
IIGNVDEGYEKVNQKLVVEKVLHVLTERERQIIQYTYLDNLSQKETGDLLNISQMHVSRL
QRRAIKKLKDAIFAEPANTESSTS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaatctcaacctgattacaaaaacactgacgtcaataaattgatcaaggcc
tttcagctccacgaagacgaagaggcccaaaacgaacttgtccttcattataaaaacttg
gtagactcaatcgcgcgcaaatattcaaaaggcaagtcataccacgaagatatttttcaa
gtgggaatcatcggcctgctcggtgctataaggcgttacgatgaatcatacgggaaatcg
ttcgaagcttttgcgatcccgacggttatcggagaaattaaacgttttttgcgcgacaag
acgtggagtgttcatgttccccgcagaatcaaggaactggggccgaaaatcaagacgacc
gtagaggatttgacgagggagcttcagcggtctccgcaaattcatgaaatcgcggaccgc
ctggatgtgacggaagaagaagtgctggaagcgatggaaatgggcaaaagctatcaagca
ttatctgtggatcattccattgaagcggattctgatggcagtaccgttactttattggat
attatcggaaatgtggacgagggctatgaaaaagtaaatcagaagcttgttgtggaaaaa
gtcttgcatgtgttgacggaaagggaaagacaaattatccaatatacgtatttggataat
ttgagccagaaggaaaccggcgacctgttaaatatttcgcagatgcatgtttcaaggctt
cagcgccgggcgattaagaagctgaaggacgccatatttgcagagccggctaatacggag
agctcaacctcatga
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