Siminovitchia fortis: QNH23_13820
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Entry
QNH23_13820 CDS
T09068
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
sfor
Siminovitchia fortis
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfor03000
]
QNH23_13820
Transcription factors [BR:
sfor03000
]
Prokaryotic type
Helix-turn-helix
Other families
QNH23_13820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
Mg_chelatase
PAS
AAA
AAA_2
PAS_4
PAS_9
MCM
HTH_23
HTH_30
HTH_28
HTH_50
DUF815
AAA_22
SYY_C-terminal
AAA_16
AAA_7
HTH_1
RuvB_N
HTH_29
HTH_psq
Diguanyl_cycl_sensor
IstB_IS21
HTH_22
Xre-like-HTH
HTH_7
AAA_3
HTH_17
Memo
Motif
Other DBs
NCBI-ProteinID:
WHY83772
LinkDB
All DBs
Position
complement(2730573..2732489)
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AA seq
638 aa
AA seq
DB search
MWEDFVYRGHLNKSIKTEIQEAWLRSRKYGVNPHVQSATKILDSDELAELQQLNHELICI
SLPLMENLYSFVKGSGFLVILCDEKGYLMKSMGDKETFELANRIKFIEGASWSEEAMGTN
AIGTCIAIDGPIQVWASEHYTEACHPWTCSAAPIHDSEGEIIGILNMSGPVEKVHPHTLG
MVVSTAAAIEKQLQIIEKTRGNAVMKSLLEATTDTLSEGMIIIDTAGKILKTNEILHRII
GKKEHELAGRDICEVFDNRFFQEITASRANVMDQEIKLKISGSERQARVLITSKGIFQNK
KKIGKLLTIKELHKVRQMINQFSGNQAKVTFQDIIGQNEKIRKVQLEAIAAARSDSNVLL
TGESGTGKDIFAQAIHNESDRRNKPFIAINCGGIPRDLLGSELFGYEDGAFTGARRGGTP
GKFELAEGGTIFLDEIGEMSLEMQVLLLRVLQDKEVVRIGGYKVVPVDVRIIAATNKNLH
KEVVKGNFREDLFFRLNVIPVTLPPLRERRDDIPRLAEYFIEKLATRIGKSYSEADPQFF
EALQRYDWPGNVRELQNILERAIVKGNGWKLGPEELPAELFGNFCAVVKEDLPMKDEIKK
QALVRSIDLCDGNYSRAARHLGISRSTLYRQMEKYGIR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaggattttgtatatcggggacatctcaacaagtcaataaaaacagaaattcag
gaggcatggctccgctccagaaaatatggcgtaaatccgcatgtccaaagtgcaacgaag
attctggatagtgatgaattggctgagctgcagcagcttaatcacgagctaatttgtatt
tcgcttcccttgatggagaatctttattcctttgtgaaagggtcggggtttcttgtcatt
ctttgcgatgaaaagggttacttgatgaagtcgatgggcgataaggaaacgttcgaattg
gcgaacaggataaaatttatcgaaggggcatcgtggagtgaggaggcaatggggacgaat
gccatcggaacatgcatcgcaattgatggacccatccaagtgtgggcctccgagcattat
acggaggcttgccatccttggacttgttcggcggcccccattcatgattcagaaggagaa
atcatcggcattttaaatatgtccggtcccgtggaaaaggtacacccgcatacattgggg
atggtcgtatcaacagcagcagcgattgaaaagcaattgcagatcattgaaaaaacgcgg
ggaaatgcggtcatgaaaagtctgctggaggcgacgacggataccctttccgaaggtatg
atcatcattgatacggccggaaaaattttaaaaacgaatgaaattttacatcgaattatc
ggtaaaaaagagcatgagcttgcaggcagggatatctgtgaggtttttgataatcgattt
tttcaggaaatcactgcttcaagggctaatgtcatggatcaggaaatcaagttgaaaatt
tccggcagcgagcggcaggcccgtgtgttgattacttcaaaaggaattttccagaataaa
aagaaaatcgggaagctgctgaccataaaagaactacataaagtaagacagatgatcaat
cagttttccggtaatcaggcaaaagtgacgtttcaagatattataggtcagaatgaaaaa
atcaggaaagttcagctggaagccattgctgcggccaggtccgattcgaatgttttgttg
accggggaaagcgggacaggaaaggacattttcgcacaggcgatccataatgaaagcgac
cggagaaataagccttttattgccatcaactgtggcggaattccgcgggatctgctgggc
agcgagctattcggctatgaagatggagcttttaccggggcaaggcgcggcgggacaccg
gggaagttcgaattggccgaagggggaacgatttttctggatgaaattggtgaaatgtca
ctggaaatgcaggtcctgctcttaagggtcctgcaagataaagaggttgtgagaatcgga
ggctacaaagtcgttcctgtagatgtcaggatcatagcagccacgaataaaaatttgcac
aaagaggtcgtgaaagggaatttccgggaagatttgttttttaggctgaacgttatcccg
gtaactcttccgccgttaagggagcggcgggacgacatcccccgtcttgcggaatatttt
attgaaaaattggccacgcgtatcggcaaatcctattctgaggcggatcctcagtttttc
gaggctctccaacgatatgactggcctggaaatgttcgcgagctgcagaatatattggaa
agagcgattgtaaaggggaatggctggaagctagggccggaagaattgccggcggaattg
ttcggcaatttttgtgcagtcgtcaaggaagatcttccaatgaaagatgaaatcaaaaag
caggcattggtccgatcgatagatctatgtgatggaaactacagccgggcagcacggcat
ctgggtatatcacgcagtacgttgtaccggcaaatggaaaaatatggtataagatag
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