Siminovitchia fortis: QNH23_17495
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Entry
QNH23_17495 CDS
T09068
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sfor
Siminovitchia fortis
Pathway
sfor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH23_17495 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfor03019
]
QNH23_17495 (recQ)
03400 DNA repair and recombination proteins [BR:
sfor03400
]
QNH23_17495 (recQ)
Enzymes [BR:
sfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNH23_17495 (recQ)
Messenger RNA biogenesis [BR:
sfor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNH23_17495 (recQ)
DNA repair and recombination proteins [BR:
sfor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QNH23_17495 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
HHH
GerE
Peptidase_C36
Motif
Other DBs
NCBI-ProteinID:
WHY81638
LinkDB
All DBs
Position
3498342..3500477
Genome browser
AA seq
711 aa
AA seq
DB search
MLTKAKGFLQSYFGFDEFRRGQDTIIRKVLEGEDTLGVMPTGGGKSICYQIPALSLRGIT
IVVSPLISLMKDQVDALEKAGIPSTFINSTIKGAEMRERMSGLYSGKYKLVYIAPERLET
DYFLRLLEEVHVSLVAIDEAHCISQWGHDFRPSYLLIRKLINKIKPKPTVLALTATATPQ
VREDIRQLLDISADNTIVTGFERENLRFHVVKGQNRDLFLTDYVQKNSGQAGIVYAATRK
EVERLYQLLKAKGIGVGKYHAGMSEKQRDRYQEQFLYDDIDVMVATNAFGMGINKSNVRF
VIHYHIPRNMESYYQEAGRAGRDGEESDCILLFAPQDSHIQSFLIDQSEMDEHRKENEFG
KLRKMMAYGHTESCLQQYILHYFGEEDPPVCGKCGNCTDDREQVDVTVEAQMVLSCIRRM
NERFGKTMIAKVLTGSADHKIRSFGFDRLSTYGIMKDKTQKETTEFIDFLTAEGYLRPTD
GSYPILMLTEMAGDVLRGKEKVMRKEKVRIAQIVEDNMLFEVLRQLRKEIADEENVPPYI
IFSDVTLKEMSALLPRNEAELMQVKGVGERKLEAYGQAFLKEINKYCEEQGIERPEVGLP
IGHTAKQRTGRVSSKEPSHHITYRMLKDGLSIAEIAAERGVAERTIEGHLLKCPADGLEV
DWSEFVPKEYEPLIQEAVEQAGAERLTPIKELLPEEISFFMIRAYLEKQKA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgttgacgaaagcaaagggctttctgcagtcttactttggatttgacgaattccgccgg
ggacaggatacgattatccgaaaagtgctggaaggtgaggatactctgggagtcatgccg
accggaggcggcaagtccatctgttaccagattcccgccttatcgctccgtggaataaca
atcgttgtctctccactgatatcactgatgaaggatcaggtggatgcattggaaaaggcc
ggtatcccttctacttttattaacagtaccattaagggtgcagaaatgcgggagcggatg
tccgggctatatagcggtaaatataaactcgtttacattgcaccggaaagattggagacc
gattattttttaaggctcctcgaagaggtgcatgtttctctcgtcgcaatagatgaggcg
cattgtatttcccagtggggccacgattttcggccgagttatttattgatccgcaaattg
attaataaaatcaaaccaaagccgacagtgttggctttgactgccacggcgactccgcag
gtgcgtgaggatatccgccagcttctggatattagtgcggacaatacaattgtgaccgga
tttgaaagggaaaatcttcgcttccatgttgtaaaggggcagaaccgcgatctgtttctg
accgactatgttcagaaaaattccggacaggcgggtatagtttatgcggcgacaaggaaa
gaagtggagcggttatatcagctgttgaaagcaaaggggatcggggttggaaaataccac
gcgggaatgtccgagaagcagcgtgatcgttatcaggagcaatttttatatgatgatatt
gatgtgatggttgctactaatgcctttggaatgggtatcaacaaatcgaacgtaaggttt
gtaatccactatcatattccgcggaacatggagtcgtattatcaagaggcaggcagggca
ggaagagacggggaagaaagtgactgcatcttgctttttgcccctcaggacagccatatc
caatcatttctcattgaccagtccgaaatggacgagcatcgtaaggaaaacgagtttggc
aagctgaggaaaatgatggcctatggccatacagagtcttgtttgcagcaatatatcctg
cactattttggcgaggaagatcctcctgtttgcggaaaatgcggcaactgcacggatgac
cgggagcaggtcgatgtgacggtggaggcccaaatggttctgtcatgcatcaggcgcatg
aatgagagattcggtaaaacgatgattgccaaggtgctgactggttccgcagatcacaaa
atacgaagtttcggatttgatcggctgtctacctatggaatcatgaaggacaagacacaa
aaggagacaacggagttcatcgattttttaacggcggaagggtatttgcgtccaactgac
ggatcatatcccattttgatgttgaccgaaatggccggggatgttttgcggggaaaagaa
aaagtgatgaggaaagaaaaggtgcgcatcgcacaaattgtggaggacaatatgctgttt
gaggtgctgcgccaacttagaaaagaaattgccgatgaggagaatgtgccgccctatatc
attttttctgatgtgacattaaaagaaatgagtgcattgcttccgagaaatgaagctgag
ctgatgcaagtcaagggtgtaggtgagcggaagttggaggcgtacggacaggcgttcctg
aaagaaataaataagtattgcgaagagcagggaattgaaaggccggaagtgggcctgccg
attgggcatacggccaaacagcggacggggagagtctcaagcaaggaaccaagccatcat
ataacctatcgaatgttaaaggacggcctttccattgcagaaattgctgctgagcgcggc
gtggcggaaaggacaatagaggggcacctgttgaaatgtcctgcagacggattggaggtg
gattggtcggaattcgtccccaaggaatatgaaccattgatacaggaagccgttgaacag
gcaggggcggaacgactaacgccaattaaagagcttcttccggaggaaatcagcttcttt
atgattcgagcctatttggaaaaacaaaaagcatga
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