Streptomyces flavofungini: QUY26_13310
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Entry
QUY26_13310 CDS
T09698
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sfp
Streptomyces flavofungini
Pathway
sfp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QUY26_13310 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfp03400
]
QUY26_13310 (xseA)
Enzymes [BR:
sfp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
QUY26_13310 (xseA)
DNA repair and recombination proteins [BR:
sfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QUY26_13310 (xseA)
BRITE hierarchy
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
WJV46425
LinkDB
All DBs
Position
3332938..3334161
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AA seq
407 aa
AA seq
DB search
MGLNTSADAPLPVGEVSRLIGGWIDRLGAIWVEGQITQLSRRPGAGVVFMTLRDPSHDIS
VSVTCYRQVFDAVADVVSEGARVVVHAKPEWYAPRGQLSLRAAEIKPVGVGELLARLEQL
KKSLAAEGLFAPDRKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQ
GVHAVAQVAQAVKELDALDEVDVIVVARGGGSVEDLLPFSDEQLVRTVASCRTPVVSAIG
HEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEYERVAFLRDRARRSVEAFLDREERGLA
HALARPCMEHPHRMVEDREEQIAAYVDRARRTLGHLLDRAESELTHTHARVVALSPAATL
QRGYAVLQKKPVDGGSGAVVRAADEVASGEELRARVAEGEFTVRVDI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgaatacgtccgctgacgcgccgcttcccgtgggcgaggtgtcccggctcatc
gggggctggatcgaccggctcggggcgatctgggtcgaggggcagatcacgcagctctcg
cgccgccccggcgcgggcgtggtgttcatgacgctgcgcgacccctcgcacgacatctcc
gtgagcgtcacgtgctaccgccaggtgttcgacgccgtcgcggacgtcgtctcggagggc
gcccgcgtcgtggtgcacgccaagccggagtggtacgcgccacggggccagctgtccctg
cgggcggcggagatcaagccggtcggcgtcggggagctgctcgcccgcctggagcagttg
aagaagtccctcgccgccgagggcctgttcgcgccggaccgcaagaagccgctgccgttc
ctgccgcagctcatcggtctggtctgcggccgtgcctcggccgcggagcgggacgtcctg
gagaacgccaggcaccgctggccggccgtccgcttcgaggtgcgcaacgtcccggtgcag
ggcgtgcacgccgtcgcccaggtggcgcaggcggtgaaggagctggacgcgctcgacgag
gtggacgtgatcgtcgtcgcgcgcggcggcggcagcgtggaggacctgctgccgttctcc
gacgaacagctggtgcgcacggtggcctcgtgccgtacgcccgtggtgtccgcgatcggc
cacgaacccgacacccccctcctggactacgtggccgacctgcgcgcctcgacccccacg
gacgcggcgaagaaggtcgtgccggacgtcggcgaggagtacgagcgcgtggcgttcctg
cgggaccgcgcgcgccgcagcgtcgaggcgttcctggaccgcgaggagcgcggcctcgcg
cacgccctggcccgcccctgcatggagcacccgcaccgcatggtcgaggaccgcgaggag
cagatcgcggcgtacgtggaccgcgcccgccgcacgctcggccacctcctggaccgcgcc
gagtcggagctgacccacacgcacgcgcgcgtggtggccctctcccccgccgccaccctc
cagcgggggtacgcggtgctgcagaagaagccggtggacggaggctccggcgcggtggtc
cgggcggcggacgaggtggcgtcgggcgaggagctgcgggcccgggtcgccgagggcgaa
ttcacggtacgagtcgacatctag
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