Streptomyces flavofungini: QUY26_24975
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Entry
QUY26_24975 CDS
T09698
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sfp
Streptomyces flavofungini
Brite
KEGG Orthology (KO) [BR:
sfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfp03400
]
QUY26_24975
DNA repair and recombination proteins [BR:
sfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
QUY26_24975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Pam3_gp59
Motif
Other DBs
NCBI-ProteinID:
WJV48487
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All DBs
Position
complement(5889364..5889789)
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AA seq
141 aa
AA seq
DB search
MPDAAPSSPSVSARMSLQGSRDTAPEIAVRRLLHAAGLRYRVNVPVPGIPRRTIDIAFGK
AKIAVFMDGCFWHGCPDHATNPKANAEWWRTKLDKNMTRDRDTSRHLEAEGWIVLRFWEH
ERPEDVAAAVVRARHDRVSHP
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgcagccccgtcctcgccctctgtctcggcgcgcatgagccttcagggctct
cgcgacacagcccccgagatcgccgtccggcgcctcctgcacgcagccgggctccgttac
cgggtcaacgtgccggtgcccggaatacctcggcgcacgatcgacatcgccttcggcaag
gccaagatcgcggtgttcatggacggctgcttctggcacggctgtcctgaccacgccacg
aaccccaaggcgaacgccgaatggtggcgcaccaagctcgacaagaacatgactcgtgac
cgtgacacgtcacgacatctggaggcggaaggctggattgtgctgcgcttctgggaacac
gagcgaccggaggacgtcgccgcagcggtcgtccgcgcgcgacacgacagagtttctcat
ccgtag
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