Streptomyces flavofungini: QUY26_25695
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Entry
QUY26_25695 CDS
T09698
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sfp
Streptomyces flavofungini
Pathway
sfp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QUY26_25695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfp03400
]
QUY26_25695
Enzymes [BR:
sfp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QUY26_25695
DNA repair and recombination proteins [BR:
sfp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QUY26_25695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
PIF1
Helicase_RecD
AAA_16
NPHP3_N
DEAD
nSTAND3
TraI_hel_assoc_N
PhoH
HTH_IclR
UvrD-helicase
AAA
ABC_tran
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WJV48608
LinkDB
All DBs
Position
6041686..6043941
Genome browser
AA seq
751 aa
AA seq
DB search
MSSAAQRGPAGVPAPRMAVVEGVLERVTYANEENGYTVARVDTGRGGGDLLTVVGALLGA
QVGESLRMEGRWGSHPQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITT
HFGVDTLDVIETEPKRLIEVPGLGPKRTKKIAAAWEEQKAIKEVMVFLQGVGVSTSIAVR
IYKKYEDASISVVRNQPYRLAADVWGIGFLTADRIAQSVGIPHDSPERVKAGLQYALSQS
TDQGNCFLPEERLIADAVKLLQVDTGLVIDCLAELAADPEGVVRETVPGPDGGDDVTAVY
LIPFHRAELSLAGQVLRLLRAPEDRMPGFADVAWDKALGWLRGRTGADLAPEQEEAVKLA
LTSKVAVLTGGPGCGKSFTVRSIVELARAKRAKVLLAAPTGRAAKRLAELTGAEASTVHR
LLELKPGGDAAYDKDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPS
VGAGEVLRDLLSEDGPVPAVRLTRVFRQAQQSGVVTNAHRINAGQSPLTQGLDDFFLFVE
DDTEEAGRLTVDVAARRLPAKFGLDPRRDVQVLAPMHRGPAGAGHLNGLLQQAITPARPD
LPEKRFGGRVFRVGDKVTQIRNNYEKGANGVFNGTVGVVTALDADEQRLTVRTDEDEEVG
YDFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRARKLVVLVG
SRKALGQAVRTVSAGRRWTALDHRLAVRRGG
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgctgcacagcgaggccccgccggggtccccgcgccacgcatggccgtcgtc
gagggtgttctggagcgggtgacgtacgccaacgaggagaacggctacacggtcgcgcgc
gtggacaccgggcgcggcggcggcgatctgctgaccgtcgtcggcgcgctgctcggcgcg
caggtcggcgagtcgctgcggatggaggggcgttggggctcccacccgcagtacggcaag
cagttcaccgtcgagaactacacgacggtcctgccggccacgatccagggcatccggcgc
tatctcggctccggcctcatcaagggcatcggcccggtgatggccgaccgcatcaccacg
cacttcggcgtggacaccctcgacgtcatcgagaccgagccgaagcgcctcatcgaggtc
ccgggcctcggccccaagcgcacgaagaagatcgccgccgcgtgggaggagcagaaggcc
atcaaggaagtgatggtcttcctccagggcgtcggcgtctccacgtccatcgccgtgcgg
atctacaagaagtacgaggacgcctccatctcggtggtccggaaccagccgtaccgcctg
gccgccgacgtgtggggcatcggcttcctcaccgccgaccgcatcgcgcagtccgtcggc
atcccgcacgacagcccggagcgcgtcaaggccggtctccagtacgccctttcgcaatcc
accgaccagggcaactgcttcctgcccgaggagcgcctgatcgccgacgcggtcaagctc
ctccaggtcgacacgggcctcgtcatcgactgcctggccgagctggcggcggacccggag
ggagtggtccgcgagaccgttccgggaccggacggcggcgacgacgtcacggccgtctat
ctgatccccttccaccgcgccgagctgtccctcgcgggccaggtcctgcggctcctgcgc
gcgccggaggaccggatgccgggcttcgcggacgtcgcctgggacaaggcgctcggctgg
ctcagggggcgcacgggagccgacctggcccccgagcaggaggaggccgtcaagctcgcc
ctgaccagcaaggtcgccgtcctcaccggcgggcccggctgcggcaagtccttcacggtc
cgctcgatcgtggagctggcccgcgccaagagggcgaaggtcctgctcgccgcgcccacg
ggccgcgccgccaagcgcctcgccgaactgaccggcgccgaggcctccaccgtccaccgc
ctcctggagctgaagccgggcggtgacgccgcgtacgacaaggaccggcccctggacgcc
gacctggtggtcgtcgacgaggcctccatgctcgacctgctcctggccaacaagctggtg
aaggccgtcccgccgggcgcccacctgctcttcgtgggcgatgtggaccagttgcccagc
gtcggcgcgggcgaggtcctgcgggacctgctcagcgaggacgggcccgtgcccgcggtc
cgcctcacccgggtcttccgccaggcgcagcagtccggcgtcgtcaccaacgcccaccgc
atcaacgccgggcagtcgcccctcacccagggcctggacgacttcttcctcttcgtcgag
gacgacaccgaagaggccgggcggctcaccgtcgacgtggccgcccgcaggctgcccgcg
aagttcggcctcgacccgcgccgggacgtgcaggtcctcgcccccatgcaccgcggcccg
gcgggcgcgggccacctgaacggcctgctccagcaggccatcacccccgcccgcccggat
ctgccggagaagcgcttcggcggccgcgtcttccgcgtcggcgacaaggtcacccagatc
cgcaacaactacgagaagggcgccaacggcgtcttcaacggcacggtgggcgtggtcacc
gccctggacgccgacgagcagcgcctgacggtccgcacggacgaggacgaggaggtcggg
tacgacttcgacgaactcgacgaactcgcccacgcctacgcggtgacgatccaccgctcc
cagggaagtgagtacccagcggtggtgatcccggtcaccaccggcgcctggatgatgctc
cagcggaatctgctctacacggccgtgacccgtgccaggaagctggtcgtcctggtcggt
tcgcgcaaggctctggggcaggcggtccgcacggtctccgcgggccgcagatggacggcg
ctggaccatcggctggcggttcgacgcggcggctga
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