Streptomyces flavofungini: QUY26_31270
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Entry
QUY26_31270 CDS
T09698
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sfp
Streptomyces flavofungini
Pathway
sfp03030
DNA replication
sfp03430
Mismatch repair
sfp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QUY26_31270
03430 Mismatch repair
QUY26_31270
03440 Homologous recombination
QUY26_31270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfp03032
]
QUY26_31270
03400 DNA repair and recombination proteins [BR:
sfp03400
]
QUY26_31270
Enzymes [BR:
sfp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QUY26_31270
DNA replication proteins [BR:
sfp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QUY26_31270
DNA repair and recombination proteins [BR:
sfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QUY26_31270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WJV49612
LinkDB
All DBs
Position
complement(7296121..7297239)
Genome browser
AA seq
372 aa
AA seq
DB search
MLEDRTTAPPTAPTATPATPESPATTDASAPGSETPWPTAYPSGYAVVDVETTGLSRDDR
IISAAVYRLDARGEVEDHWYTLVNPQRDPGPVWIHGLTSDKLADAPLFADIAEEFATRLA
DRVLVAHNAVFDWSMIAREYARAERTAPVRQRLCTIALSKELGLPLPNHKLESLAAHFGV
VQRHAHHALDDARVLAEAFRPSLRAAASGGVRLPLLECRPLTEWSDGARIGRQGGRSPGS
GAPSASPSYAGYSSYQPGSWRPSRKRPACPFPNPGRWEDGKPLKQGMRVAFSGDTSVDRE
LLEDRAFEAGLHIATSVSRLTSLLVTNDPDSGTSKTTKARAYGTPVIDEAAFGQLLQDVA
PADAPARTRSER
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccgcacgaccgcaccgccgacggcgccgaccgcgactccggcgaccccg
gaatccccggcgacgaccgacgcgtccgcgccggggtccgagaccccctggccgaccgcc
tacccttcggggtacgcggtcgtcgacgtcgagaccaccggcctgtccagagacgaccgg
atcatctcggccgcggtctaccgcctggacgcccgcggcgaggtcgaggaccactggtac
acactggtgaacccgcagcgcgaccccggcccggtctggatccacggcctgacgagcgac
aaactggccgacgccccgctcttcgccgacatcgccgaggagttcgcgacccgcctcgcg
gaccgcgtcctcgtcgcgcacaacgccgtcttcgactggtcgatgatcgccagggagtac
gcccgcgcggagcgcaccgcccccgtccgtcagcgcctgtgcaccatcgcgctctccaag
gagctcggcctgccgctgcccaaccacaagctggagtccctcgcggcccacttcggcgtc
gtccagcgccacgcccaccacgccctcgacgacgcccgggtcctcgccgaggcgttccgg
ccgagcctgcgggcggcggcgagcgggggcgtgcggctgccgctcctggagtgccgcccg
ctgaccgagtggtcggacggcgcccgcatcggccgtcagggcggccgctcccccgggtcc
ggcgccccttcggcgtctccgtcgtacgcggggtactcctcgtaccagcccggcagttgg
cgcccctcccgcaagcgccccgcctgtccgttcccgaaccccgggcggtgggaggacggc
aagcccctcaagcagggcatgcgcgtcgccttctccggggacacctccgtggaccgcgag
ctcctggaggaccgggcgttcgaggcgggcctgcacatcgcgacgagcgtgtcgcggctg
acgagcctgctcgtcaccaacgacccggactcgggcacgtcgaagacgacgaaggcccgg
gcgtacggcacgccggtcatcgacgaagcggccttcggccaactcctccaggacgtggcc
ccggcggacgccccggcgcggacccggtcggaaagatga
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