Shewanella frigidimarina: Sfri_0013
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Entry
Sfri_0013 CDS
T00395
Name
(GenBank) short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00071
Fatty acid degradation
sfr00280
Valine, leucine and isoleucine degradation
sfr00310
Lysine degradation
sfr00362
Benzoate degradation
sfr00380
Tryptophan metabolism
sfr00410
beta-Alanine metabolism
sfr00640
Propanoate metabolism
sfr00650
Butanoate metabolism
sfr00907
Pinene, camphor and geraniol degradation
sfr00930
Caprolactam degradation
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr01120
Microbial metabolism in diverse environments
sfr01200
Carbon metabolism
sfr01212
Fatty acid metabolism
Module
sfr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Sfri_0013
00650 Butanoate metabolism
Sfri_0013
09103 Lipid metabolism
00071 Fatty acid degradation
Sfri_0013
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sfri_0013
00310 Lysine degradation
Sfri_0013
00380 Tryptophan metabolism
Sfri_0013
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Sfri_0013
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sfri_0013
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sfri_0013
00930 Caprolactam degradation
Sfri_0013
Enzymes [BR:
sfr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Sfri_0013
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Sfri_0013
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Sfri_0013
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Sfri_0013
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
ABI69876
UniProt:
Q08A39
LinkDB
All DBs
Position
complement(16763..18913)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAQGSVNKFDRETIASLDAALDSIKQNTNIKALLLTSA
KSTFIVGADITEFLTLFQQDDATLLAWVEQANAVFNKLEDLPFPTASAINGFALGGGCET
ILATDLRVADTNARIGLPETKLGLIPGFGGTVRLPRVIGADNALEWITTAKDQRPEDALK
VGAIDAVVAPENLEAAAIQMLHDALNGSLDWQARRTKKQSPLQLPKLEAMMSFATAKGMV
FSVAGKHYPAPMAAVNVVEQAAGLDRDGALKVEALAFIKLAKTDVAQALIGIFLNDQFVK
GKAKKAGKLAKDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLNEAAKIL
TTQVARGRSTPEKMAKVLNNITPSLDYAAIKNSDIVVEAVVEHPKVKATVLAEVEGYVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQKNTKGFYAYSVDRRGKP
KKDIDPTSYELLSAEFGELKAFESDDIIARCMIPMIIETVRCLEEGIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctaccattcaggttgagttacttgaagataatattgccaaactg
tgttttaacgcacaaggttcggtaaataaattcgacagagaaacaatagcctctcttgat
gccgccctagacagcatcaaacaaaataccaatattaaagccttgctgctgacatcagca
aaaagcacctttattgttggcgcagacattaccgaattcttaacgctatttcagcaagac
gatgccacgttgctagcttgggttgaacaagccaacgcagtattcaataagctagaagac
ttaccgtttccgacagcatcagcgattaacggttttgcgttaggcggtggttgcgaaacc
attttagcgactgacttacgcgttgctgataccaatgctcgcatcggtttaccagaaacc
aaattaggtcttattcctggttttggtggcactgtgcgtttacctcgagtaatcggtgca
gataatgcacttgagtggattaccacagctaaagaccaacgcccagaagatgcgttaaaa
gtaggcgctattgatgccgttgttgcaccagaaaacctagaagctgctgcgattcaaatg
ttgcatgatgcccttaatggtagccttgattggcaagctcgtcgcaccaaaaagcaatca
ccattacagttaccaaaacttgaagccatgatgtcttttgctaccgcaaaaggaatggtg
ttttctgttgcaggcaagcattatccagcgccaatggccgctgtgaatgttgttgaacaa
gctgcaggtttggaccgtgatggagcattaaaagtagaagcgctggcgttcattaaatta
gctaaaacagatgtcgcacaagcgctaattggtattttcttaaatgaccagttcgttaaa
ggtaaagcaaagaaagccggtaaactcgctaaagatgttaaccaagcagcagtattgggt
gcaggtattatgggcggcggcattgcttaccaaagcgccagcaaaggcacaccaattgta
atgaaagacattgctcagccagcattagagttaggcttgaacgaagcggctaaaattctg
acaacacaagttgcgcgcggtcgctctacgccagagaaaatggctaaagtattaaacaac
atcacgccttcactagattatgccgctatcaaaaatagcgatatcgttgtagaagcggtt
gttgaacatccaaaagttaaggctactgtactagcagaagttgaaggttacgtatcagaa
gatgccattattgcatcaaatacctcgactatctcaatcaacttactggctaaaagcctt
aagaaacctgaacgtttctgcggtatgcacttctttaaccctgtgcacaaaatgccatta
gttgaaattatccgtggtgagcacagctctgaagaaaccatcgcaacggtagtggcttac
gccagcaaaatgggtaaaactccaatcgtagtcaatgattgccccggcttctttgttaac
cgcgtattgttcccatactttgcaggcttcagtggtctacttgctgaaggtgctgacttt
gctgccgttgataaagtcatggaaaaacagttcggttggccaatgggcccagcttactta
cttgacgtagtcggtttagatactggtcaccacgcccaagcagttatggctgaaggcttc
ccagatcgcatgggtaaaaatggcaaagacgctatcgacattatgtttgaaaacaaacgt
ctaggtcagaaaaacactaaaggtttctatgcctattctgttgaccgtcgtggtaagccg
aagaaagacattgatccaacaagctatgaattattaagcgctgagttcggtgaattaaag
gcattcgagtctgatgacatcatcgctcgctgtatgatcccgatgatcatcgaaacggtt
cgttgtttagaagaaggcattattgcatcacctgctgaaggcgatatgggtctagtttac
ggtattggtttccctccattccgtggcggtgtattccgttacttagacaccatgggcgta
gcaaactttgttgccctagcagacaaatacgcacatcttggtggcttatatcaggttacc
gatgcaatgcgtgcacttgcagccaacaatggtagttactaccaagcctaa
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