Shewanella frigidimarina: Sfri_0057
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Entry
Sfri_0057 CDS
T00395
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00630
Glyoxylate and dicarboxylate metabolism
sfr00680
Methane metabolism
sfr01100
Metabolic pathways
sfr01120
Microbial metabolism in diverse environments
sfr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sfri_0057
09102 Energy metabolism
00680 Methane metabolism
Sfri_0057
Enzymes [BR:
sfr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Sfri_0057
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TAT_signal
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
ABI69920
UniProt:
Q089Z5
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All DBs
Position
70083..72932
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AA seq
949 aa
AA seq
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MRLTRKTDTATKAEKSGLGLNRRQFLKSASLATGGIAAASMLGAGMMRKAEAKDVPHNAP
TEIKRTICSHCSVGCGVYAEVQNGVWTGQEPAFDHPFNQGGHCAKGAALREHGHGEKRLK
YPMKLEGGKWKRLSWDQAINEVGDKMESIRQESGPDSVYFMGSAKFSNEQAYMYRKLAAM
WGTNNVDHSARICHSTTVAGVANTWGYGAQTNSFNDIRNSKCMMFIGSNPCEAHPVAMQH
ILIGKERGAKIIVVDPRFTRTAAKSDEYVHIRPGTDIPFIYGLLWHIFENGWQDDSFISQ
RVYGMERIREEVKKYTPEEVEHIAGVPKAQMYRVAKMMAETKPGTIVWCMGGTQHHIGNA
NTRAYCILQLALGNMGIEGGGTNIFRGHDNVQGATDFGLLFDNLPGYYGLTSGAWDHWAN
VWDLEPKWITERFDQGEYLGQSPQTSAGIPCSRWHDGVLEDKTKIAQKDNIRLGFFWGQS
VNTETRGREVREALNKMDTIVVVDPFPTMAGVMHERQDGVYLLPAATQFETYGSVSASNR
SLQWRTQVIEPLFESLPDHTIMYKLAKKWGVADQFCKHIKVNGDEPLVEDITREFNTGMW
TIGYTGQSPERLKMHQENWGTFDVNSLEAPGGPAKGETYGLPWPCWGTPEQKHPGSQILY
RTGREVKDGGGNFRARYGVEHNGNNILAEGSFSKGSEIQDGYPEFTADMLKQLGWWDDLT
AEEKVKAEGKNWKTDISGGIQRVAIKHGCMPYGNAKARCIVWNFPDDIPLHREPLYTPRR
DLVAKYPTYEDRMVARLPTLYKTIQDKDFATDYPLAVTTGRLVEYEGGGEETRSNPWLAE
LQQEMFIEINPADAADRGLRDGDDVFVHSPEGAKITVKAMVTPRVIAGECFMPYHFAGVF
EGKSLAKNYPEGTVPYVIGESANTVMTYGYDVVTQMQETKSSLCQISKA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacccgcaaaacagacacggccaccaaagctgaaaagtcaggcctaggtctt
aaccgacgtcaattcctcaagtctgccagtttggcgacgggtggtattgcagcggcttca
atgcttggcgcaggtatgatgcgtaaagctgaagctaaagatgtaccgcacaacgcacct
acagaaataaaacggacgatttgttcacattgttcagtaggttgtggtgtttatgctgaa
gttcaaaatggtgtgtggacagggcaagagcctgcgttcgatcatccatttaaccaaggt
ggacattgtgctaaaggcgcagcattacgtgagcatggtcatggtgaaaaacgcttaaaa
tacccaatgaagctagaaggtggtaaatggaagcgtctatcatgggatcaagccatcaat
gaagtaggcgacaaaatggagtcgattcgtcaagagtctggtcctgattcagtttacttt
atgggtagtgctaaattttcgaacgaacaagcttatatgtatcgcaaattagcagcaatg
tggggcactaacaacgtcgatcactctgctcgtatttgtcactctaccacggtagccggt
gttgcaaacacttggggctacggtgcgcaaactaactcgtttaacgacatccgcaattca
aaatgcatgatgtttattgggtctaacccatgtgaagctcacccagtggcgatgcaacac
attttgattggtaaagaacgcggtgccaaaatcatcgtagtcgatccacgttttacccgt
acagcggctaagtctgatgaatatgtccatattcgtccaggtactgacattccatttatt
tatggtctgttatggcacattttcgaaaacggctggcaagatgattcattcatttctcaa
cgagtatacggcatggaacgtatccgagaagaagtgaaaaaatacactccagaagaagtc
gagcatattgccggtgtgccaaaagcacaaatgtaccgtgttgcgaaaatgatggcagaa
actaagcctggcactatcgtttggtgtatgggtggtactcagcatcacattggtaatgct
aacactcgtgcttactgtattttacagcttgcccttggcaacatgggtatagaaggcggc
ggaactaacattttccgtggtcacgataacgtacagggtgcgactgactttggtttgtta
tttgataacttacctggttattacggcttaacctcaggcgcatgggaccattgggccaat
gtgtgggaccttgaaccaaagtggatcaccgaacgttttgatcaaggtgaatacttaggt
caatcaccacaaacatctgcaggtattccttgttcgcgttggcacgatggtgtgttagaa
gacaaaaccaaaattgcccaaaaagacaatattcgtctgggattcttttggggtcagtct
gttaacaccgaaactcgtggtcgcgaagtacgtgaagcactgaataaaatggataccatt
gtggtcgttgatccattcccaaccatggcgggtgttatgcacgaacgccaagatggagtg
tatttattacccgcggcaactcagtttgaaacttatggttcagtgtctgcttcaaaccgt
tcactgcagtggcgtacgcaagttatcgaaccattatttgagtcattacctgatcacact
atcatgtataaactggccaaaaaatggggcgttgcggaccaattctgtaagcacatcaag
gttaatggcgatgagccattagtggaagacattacacgtgaatttaacaccggtatgtgg
actattggttatacaggccaaagccctgaacgtttgaaaatgcaccaagaaaactggggc
acattcgacgttaactcacttgaagcacccggcggcccagctaaaggcgaaacctatggt
ttaccttggccatgttggggtacaccagagcagaaacaccctggttctcaaatcttgtac
cgcaccggacgtgaagttaaagacggtggtggtaacttccgtgcacgttatggtgttgaa
cataacggcaataacattcttgctgaaggttctttctcaaaaggctctgaaattcaagat
ggttacccagagtttacagccgacatgctaaaacagcttggttggtgggatgacctaaca
gcagaagaaaaagtcaaagctgaaggtaaaaactggaaaactgatatctctggcggtatt
cagcgtgtggcaattaagcatggttgtatgccttacggtaacgcaaaagcgcgttgtatc
gtgtggaacttccctgacgatattccattacatcgtgaaccgttatacacccctcgtcgt
gacctagtggctaaataccctacttatgaagaccgtatggtggctcgtctaccaacgctt
tataaaaccattcaagacaaggattttgctaccgactacccacttgcagtaacaaccgga
cgtttggttgaatacgaaggtggtggtgaagaaacccgttcaaacccatggcttgcagaa
ctacagcaagaaatgtttatcgagatcaacccagcagatgctgcagatcgcggtttacgt
gatggcgatgacgtatttgttcacagtccagaaggtgcaaaaattaccgttaaggcaatg
gtgacaccacgtgttattgcaggtgaatgttttatgccataccactttgcaggcgtattt
gaaggcaagagtttagccaaaaactaccctgaaggaaccgttccttatgtgattggcgaa
tctgccaataccgtaatgacctatggttatgatgtcgtaacgcaaatgcaagagaccaag
tctagcttgtgtcaaataagcaaagcctaa
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