Shewanella frigidimarina: Sfri_0119
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Entry
Sfri_0119 CDS
T00395
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_0119
Enzymes [BR:
sfr01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
Sfri_0119
Transfer RNA biogenesis [BR:
sfr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sfri_0119
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_16
Zeta_toxin
AAA_18
AAA_19
ALN
Motif
Other DBs
NCBI-ProteinID:
ABI69982
UniProt:
Q089T3
LinkDB
All DBs
Position
complement(131666..132766)
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AA seq
366 aa
AA seq
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MSEVIPSSEYGRLLLENRPLIDVRAPIEFTKGAFGHSINLPLMQDGEREKVGTCYKKRGQ
EAAIALGHELVKGKVKQQRIDAWLAQLSQHPDSYLYCFRGGLRSKLSQQWIKESGMDIPY
IEGGYKAIRSFLINTIEQAPSQSKVLILSGITGSGKTEVIHQRDESVDLEGLANHKGSSF
GKNIDPQPSQINFENNLAVALLKHQQQQHNHLLLEDESMLIGRSALPKHFYSAMQQADII
VLDEPLDARLPRLLNDYVEQKLTDYVSGLGEQAGFDAFKAYLAQSLLGIRKRLGGKQHQE
LQDLVDNALNVQQSQNDTSKHLDWINLLLDIYYDPMYLYQLEKKQDRVIFQGDRQAIHQW
LDKHKS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggttattcccagctcagaatatggcagacttctattagaaaaccgtccatta
atagacgtaagagcgcctatcgaatttactaaaggcgcttttggccactcgattaattta
ccgttaatgcaagatggtgaacgcgaaaaagtgggtacatgctataaaaaacgtggccaa
gaagctgctatagcattaggtcatgagctggtgaaaggtaaagttaaacaacaacgtata
gatgcttggcttgctcagctctcacaacatcctgacagttatttatattgttttcgtggc
ggtttgcgctcaaagctatcacagcaatggattaaagaatcaggcatggacatcccttat
attgaagggggttacaaagccatacgtagttttttaattaatactatcgagcaagcgcca
agccaatctaaagtgctgattttaagtggtataacaggtagtggtaaaacggaagttatc
catcagcgagatgagtctgtcgaccttgaaggccttgccaaccataaagggtctagcttt
ggcaaaaatatcgatccgcaacccagtcaaattaacttcgaaaataatttagccgtggca
ttgctgaagcatcaacaacagcaacataaccatttgctattagaagatgaaagtatgcta
attggtcgttcagccctgccgaagcatttttacagcgcgatgcagcaagctgatattatc
gtactcgacgaaccattagacgcacgtttgccgcgtttattaaatgactatgttgaacaa
aaactgactgattatgtatctggattaggtgagcaagcgggtttcgatgcatttaaagct
tatttggctcaaagcttattgggcattcgtaaacgcttaggcggtaagcaacatcaagaa
ttgcaggacttggttgataatgcgctaaacgtacaacaaagccaaaatgataccagtaag
catttagactggataaatctgttactcgatatttattatgacccgatgtatctatatcaa
cttgaaaagaaacaggacagagttatctttcaaggcgacagacaagctatacatcaatgg
ttagataaacataagtcataa
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