Shewanella frigidimarina: Sfri_0124
Help
Entry
Sfri_0124 CDS
T00395
Name
(GenBank) transcriptional regulator, TetR family
KO
K22105
TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_0124
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Sfri_0124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_46
TetR_C_32
HTH_29
Phage_lysozyme
TetR_C_15
HTH_IclR
HTH_24
HTH_20
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABI69987
UniProt:
Q089S8
LinkDB
All DBs
Position
137823..138440
Genome browser
AA seq
205 aa
AA seq
DB search
MGVRAQQKEKTRRALVDAAFNQLSAERSFSSLSLREVAREAGIAPTSFYRHFKDMNELGL
TMVDEGGLTLRQMMRKGRQRAEAGGSVIRISVDTFMEVLESNPNVFRILLHERSGTSAAF
RAAVEREIEHFISELAHYTEAQANRTPVLARAQAEALVILVFNAGASALDSKRSERKSLA
DQLVLQLRMVATGAEALQHKIDNRA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttagagcacaacaaaaggaaaaaacacgtcgtgcattagtggatgctgcattt
aatcaactcagtgctgaacgaagtttttccagcctaagcttacgtgaagttgctcgcgaa
gctggtattgcgcccacatcattctatcgccattttaaagatatgaacgaacttggcttg
accatggtcgatgaaggcggattaacattacgtcaaatgatgcgtaaaggtcgtcaacgt
gcggaagctggtggtagtgtgatccgtatttctgtcgacacttttatggaagtattagag
tcaaatccgaacgtatttcgaatactattacacgaacgctccggtacctcagcagcattt
agagctgcagttgagcgtgaaattgaacattttatttctgaacttgcccattacaccgaa
gcacaggcaaaccgaacacctgtattagcgcgtgctcaagctgaagcgttggttatttta
gtgtttaatgcgggagcatcagctttggactctaaacgtagtgagcgtaaatcattggcc
gatcagctcgtactgcagttgcgtatggtcgcaacgggagctgaagcgctacagcacaaa
atagacaatcgcgcctaa
DBGET
integrated database retrieval system
