Shewanella frigidimarina: Sfri_0125
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Entry
Sfri_0125 CDS
T00395
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_0125
Enzymes [BR:
sfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
Sfri_0125
Transfer RNA biogenesis [BR:
sfr03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Sfri_0125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_15
Cons_hypoth95
Methyltransf_11
TRM5-TYW2_MTfase
PrmA
Methyltransf_31
MTS
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ABI69988
UniProt:
Q089S7
LinkDB
All DBs
Position
complement(138520..139617)
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AA seq
365 aa
AA seq
DB search
MNLAAMDPKNYDAQLQQKRIKLEKAFADFNPPALEVFASEPMHYRMRAEFRMWHQGDDLY
YYMFDKALNAKVRCDQYLPAGLIINQMMAALIAELTPNPALRYRLFQVDFLSTLSGEILV
SLLYHRQLDEEWREQATQLKAKLSAQFNVNIIGRARKQKIDLDKDFVVETLTVNEQVLHY
KQIENSFTQPNAKVSVKMLEWAIDATKDSQGDLLELYCGNGNFTIALARNFNRVLATELA
KPSVDAAQYNIDINHVDNVQIIRMSAEDFSDAMAKKRQFRRLEGIDLDSYDCNTIFVDPP
RAGIDPETLKLIQGYERILYISCNPETLNDNLLTLGQTHKITRFALFDQFPYTDHMESGV
LLVRK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagctgcaatggatcctaaaaactacgatgcacaattacaacaaaagcgcatc
aagctagaaaaggcctttgccgatttcaatccaccagcacttgaagtctttgcttctgag
cctatgcattatcgtatgcgtgctgaatttaggatgtggcatcaaggtgatgacttatat
tactacatgtttgataaagcactgaatgcaaaagtgcgttgcgatcaatatttacctgcg
ggtttaatcattaatcaaatgatggctgcattaattgcagaattaacacctaaccctgca
ttacgttatcggttgtttcaagttgatttcttgtcgacgttaagtggcgaaattttagtg
tctttgttgtaccaccgccagcttgatgaagaatggcgtgaacaagcgactcaattaaaa
gctaagctatctgctcaattcaatgtcaacattataggccgtgcgcgtaagcaaaaaatc
gatttagacaaagattttgttgttgagaccttaacggttaatgaacaggtattgcattac
aaacaaattgaaaacagctttactcagccgaatgcaaaagtctctgtaaaaatgttggaa
tgggctattgatgcgactaaagacagccagggtgatttactagaattgtactgtggtaat
ggtaattttacgattgcactggcacgaaatttcaatcgtgtattggcaacagagctggcc
aagccttcagttgatgcagcgcaatacaacatcgatattaatcacgttgataatgttcaa
attattcgcatgtctgctgaagactttagtgatgctatggcgaaaaagcgccaatttaga
cgtttagaaggcatcgacttagacagctacgattgtaatactatctttgttgaccctcct
cgtgcaggcattgaccctgaaacattaaagcttatccaaggttatgagcggattttgtat
atttcatgtaatccagaaacactgaatgacaatttgttaaccttaggccaaacgcataaa
ataacgcgctttgcgctatttgaccaatttccatataccgaccatatggaatcgggcgta
ttactggttcgcaagtaa
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