Shewanella frigidimarina: Sfri_0229
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Entry
Sfri_0229 CDS
T00395
Name
(GenBank) fumarate lyase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00020
Citrate cycle (TCA cycle)
sfr00620
Pyruvate metabolism
sfr00720
Other carbon fixation pathways
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr01120
Microbial metabolism in diverse environments
sfr01200
Carbon metabolism
Module
sfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sfr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfr_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sfri_0229
00620 Pyruvate metabolism
Sfri_0229
09102 Energy metabolism
00720 Other carbon fixation pathways
Sfri_0229
Enzymes [BR:
sfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Sfri_0229
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
ABI70092
UniProt:
Q089H3
LinkDB
All DBs
Position
complement(251511..252884)
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AA seq
457 aa
AA seq
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MSKMRIEYDSMGKVQVPDDVYYQAQTQRARDNFQFSERRFPTPAILALLDIKSAAAQANS
QLGLLDSAMAKAIQQAIIAAKKLHFSQHFPIDLFQTGSGTSSNMNVNEVIASLASDILQA
KVHPNDHVNMGQSSNDVVPACIHISTVRQLKGLLYPAIKGLNDRLAFLADEYSNTVKTGR
THLMDAMPITLGQELQCWQQQLNSAQARIQQVELSLHQLPLGGTAVGTGVNCDPNFAKLA
CDDLQQQDKIPWQAAVMPALYMSSQDHTLAMASALKGLAVTLLKIANDLRWMNSGPVAGL
QEISLTALQPGSSIMPGKVNPVIPEAVAMIAAEVIGNETTITIAAQSGNFQLNVMLPLIA
DKLLSSIDLLTHACQAMTDKVFAEFQPNVEHLTQALEKNPILATALNSVVGYDMAAKIAK
RADKEHKSVLAIALEETDLDEEKLKAILDPLHLAKPY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagatgcgtatagaatatgacagtatgggaaaagtacaggtgccagatgatgtt
tattatcaggcgcaaactcaacgcgcacgagataactttcagttttctgagcggcgcttt
ccgacgccagcgatactcgccctactcgatataaaatcagctgctgcacaggctaatagc
caactcggtttattagatagcgccatggccaaagcaattcaacaagcgattatcgccgct
aagaagcttcatttttcgcagcattttccgattgatttgttccaaacaggctctggcacc
agttctaatatgaatgttaatgaagtcattgccagcctcgccagcgatattttgcaggca
aaggttcaccctaatgatcatgtcaatatggggcaaagcagtaacgatgtggtgcctgcc
tgtattcatattagtacggttaggcaattaaagggcttattgtatccggccattaagggc
ttgaatgacagattagcgtttttggccgatgagtattccaatacagtcaaaactggtcgc
acccatttaatggacgccatgccgattacgcttggccaagaactgcaatgttggcaacaa
cagctcaacagtgctcaagctcgaattcagcaagttgagctgagcctgcatcaattgcca
ttgggcggcacagcggttggcactggcgttaattgtgaccccaattttgccaaacttgca
tgtgatgatttacaacagcaagataaaatcccttggcaggcggcggtaatgcctgcgttg
tatatgagtagccaagatcacaccttagccatggcttctgcgctcaaagggttagcggtt
acgttattgaaaatagccaatgatttacgctggatgaactctggccctgtagcagggtta
caagaaattagcttaacggcactgcaacctggctcatcgataatgcccggtaaggttaat
cccgttatcccagaagccgtagccatgattgccgctgaagtcattggcaatgaaactacc
attaccatcgcagcacaatcgggtaattttcaattgaatgtgatgttgccactgattgcc
gacaagctactgtccagtattgatttattaacccatgcctgccaggccatgaccgacaaa
gtgtttgccgagtttcaacccaatgtcgagcatttgacccaggcattggagaaaaatccg
attctggctaccgcgcttaattcagtggtgggttacgatatggccgcaaaaattgctaaa
cgtgcagacaaagaacataaatcagtattagccattgcacttgaagaaaccgatttggac
gaagagaaactcaaagcgatactcgacccgttgcatctggcaaagccgtattaa
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