KEGG   Shewanella frigidimarina: Sfri_0229
Entry
Sfri_0229         CDS       T00395                                 
Name
(GenBank) fumarate lyase
  KO
K01679  fumarate hydratase, class II [EC:4.2.1.2]
Organism
sfr  Shewanella frigidimarina
Pathway
sfr00020  Citrate cycle (TCA cycle)
sfr00620  Pyruvate metabolism
sfr00720  Other carbon fixation pathways
sfr01100  Metabolic pathways
sfr01110  Biosynthesis of secondary metabolites
sfr01120  Microbial metabolism in diverse environments
sfr01200  Carbon metabolism
Module
sfr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sfr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfr_M00982  Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Sfri_0229
   00620 Pyruvate metabolism
    Sfri_0229
  09102 Energy metabolism
   00720 Other carbon fixation pathways
    Sfri_0229
Enzymes [BR:sfr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.2  fumarate hydratase
     Sfri_0229
SSDB
Motif
Pfam: Lyase_1 FumaraseC_C
Other DBs
NCBI-ProteinID: ABI70092
UniProt: Q089H3
LinkDB
Position
complement(251511..252884)
AA seq 457 aa
MSKMRIEYDSMGKVQVPDDVYYQAQTQRARDNFQFSERRFPTPAILALLDIKSAAAQANS
QLGLLDSAMAKAIQQAIIAAKKLHFSQHFPIDLFQTGSGTSSNMNVNEVIASLASDILQA
KVHPNDHVNMGQSSNDVVPACIHISTVRQLKGLLYPAIKGLNDRLAFLADEYSNTVKTGR
THLMDAMPITLGQELQCWQQQLNSAQARIQQVELSLHQLPLGGTAVGTGVNCDPNFAKLA
CDDLQQQDKIPWQAAVMPALYMSSQDHTLAMASALKGLAVTLLKIANDLRWMNSGPVAGL
QEISLTALQPGSSIMPGKVNPVIPEAVAMIAAEVIGNETTITIAAQSGNFQLNVMLPLIA
DKLLSSIDLLTHACQAMTDKVFAEFQPNVEHLTQALEKNPILATALNSVVGYDMAAKIAK
RADKEHKSVLAIALEETDLDEEKLKAILDPLHLAKPY
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgagtaagatgcgtatagaatatgacagtatgggaaaagtacaggtgccagatgatgtt
tattatcaggcgcaaactcaacgcgcacgagataactttcagttttctgagcggcgcttt
ccgacgccagcgatactcgccctactcgatataaaatcagctgctgcacaggctaatagc
caactcggtttattagatagcgccatggccaaagcaattcaacaagcgattatcgccgct
aagaagcttcatttttcgcagcattttccgattgatttgttccaaacaggctctggcacc
agttctaatatgaatgttaatgaagtcattgccagcctcgccagcgatattttgcaggca
aaggttcaccctaatgatcatgtcaatatggggcaaagcagtaacgatgtggtgcctgcc
tgtattcatattagtacggttaggcaattaaagggcttattgtatccggccattaagggc
ttgaatgacagattagcgtttttggccgatgagtattccaatacagtcaaaactggtcgc
acccatttaatggacgccatgccgattacgcttggccaagaactgcaatgttggcaacaa
cagctcaacagtgctcaagctcgaattcagcaagttgagctgagcctgcatcaattgcca
ttgggcggcacagcggttggcactggcgttaattgtgaccccaattttgccaaacttgca
tgtgatgatttacaacagcaagataaaatcccttggcaggcggcggtaatgcctgcgttg
tatatgagtagccaagatcacaccttagccatggcttctgcgctcaaagggttagcggtt
acgttattgaaaatagccaatgatttacgctggatgaactctggccctgtagcagggtta
caagaaattagcttaacggcactgcaacctggctcatcgataatgcccggtaaggttaat
cccgttatcccagaagccgtagccatgattgccgctgaagtcattggcaatgaaactacc
attaccatcgcagcacaatcgggtaattttcaattgaatgtgatgttgccactgattgcc
gacaagctactgtccagtattgatttattaacccatgcctgccaggccatgaccgacaaa
gtgtttgccgagtttcaacccaatgtcgagcatttgacccaggcattggagaaaaatccg
attctggctaccgcgcttaattcagtggtgggttacgatatggccgcaaaaattgctaaa
cgtgcagacaaagaacataaatcagtattagccattgcacttgaagaaaccgatttggac
gaagagaaactcaaagcgatactcgacccgttgcatctggcaaagccgtattaa

KEGG   Shewanella frigidimarina: Sfri_2156
Entry
Sfri_2156         CDS       T00395                                 
Name
(GenBank) fumarase
  KO
K01676  fumarate hydratase, class I [EC:4.2.1.2]
Organism
sfr  Shewanella frigidimarina
Pathway
sfr00020  Citrate cycle (TCA cycle)
sfr00620  Pyruvate metabolism
sfr00720  Other carbon fixation pathways
sfr01100  Metabolic pathways
sfr01110  Biosynthesis of secondary metabolites
sfr01120  Microbial metabolism in diverse environments
sfr01200  Carbon metabolism
Module
sfr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sfr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfr_M00982  Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Sfri_2156
   00620 Pyruvate metabolism
    Sfri_2156
  09102 Energy metabolism
   00720 Other carbon fixation pathways
    Sfri_2156
Enzymes [BR:sfr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.2  fumarate hydratase
     Sfri_2156
SSDB
Motif
Pfam: Fumerase Fumerase_C
Other DBs
NCBI-ProteinID: ABI72002
UniProt: Q081R3
LinkDB
Position
complement(2567169..2568746)
AA seq 525 aa
MSTNTTSHSTTHSTISSQAVVIKQADFIESIADSLQYISYYHPKDFVDAMTKAYEREESA
AAKDAIAQILINSRMSAEGKRPLCQDTGIVTTFVKIGMSVQWDKTDMTVQEMVDEGVRRA
YTNPDNPLRASIVSDPAGARKNTKDNTPSVVHIDMVAGNQIEVMIAAKGGGSENKSKMAM
LNPSDDIAAWVEKTLPTMGAGWCPPGMLGIGIGGTAEKAAVLAKESLMDPVDIHELMARG
AETTEEKLRLDIFERANNLGIGAQGLGGLTTVLDVKIKSVPTHAASKPVVMIPNCAATRH
VHFHLDGTGPVDLVPPSLSDWPEITREAGENTHRVNLDTVTQAEIETWKSGDTLLLNGKM
LTGRDAAHKRIQMLLESGEGLPAGVDFTGKFIYYVGPVDPVGDEVVGPAGPTTATRMDKF
TDMMLDQTGLMGMIGKSERGPETVASIKKHKAVYLMAVGGAAYLVSKAIKKSRVVAFEDL
GMEAIYEFDVQDMPVTVAVDTNGVNAHETGPAIWKINIANSKANK
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgtcgacgaataccacatctcactctacaactcattcaactatatctagtcaagctgtc
gtgattaaacaagctgactttattgaaagtattgctgattctctgcaatacatttcgtat
taccatcccaaagactttgttgatgcgatgaccaaagcttacgagcgtgaagaaagcgct
gccgctaaagacgccattgctcaaattctgattaactcccgcatgtcagccgaaggcaaa
cgccctttatgccaagacactggaattgtcaccacctttgttaaaattggtatgtctgtt
cagtgggataaaactgacatgacagttcaagaaatggtcgatgaaggtgtacgtcgtgct
tacaccaatccagataatccattacgtgcatcaatagtgtcagatcctgccggtgcgcgt
aaaaatactaaagacaacacaccatcagtggttcatattgacatggttgctggtaatcaa
atagaagtgatgattgcagccaaaggtggtgggtcggaaaataaatccaaaatggccatg
cttaatccgtcagacgatatcgccgcttgggtagaaaaaacattaccaacaatgggcgcg
ggctggtgtccaccgggtatgttaggcataggtatcggtggtactgctgagaaagcggcc
gttctggccaaagaatcattaatggaccctgttgatattcatgagttgatggctcgtggt
gcagagaccacagaagaaaagcttcgtttagacatttttgaacgggcaaataacttaggc
ataggcgctcaagggttgggcggattaaccacagtattagacgttaaaattaaatctgta
ccgactcatgcagcgtctaaaccagtagtgatgatccctaactgcgcagcaacgcgccat
gtgcattttcatttagatggcactggtccagtcgatttagtaccaccatcgttgtctgat
tggcctgaaattactcgtgaagcgggagaaaacactcaccgtgtcaatttagatacggtc
actcaagctgaaatcgaaacttggaagagtggtgataccttattactcaacggtaaaatg
ctgactggccgcgatgcagctcataaacggattcaaatgttgcttgaatctggtgaaggt
ttaccagcaggtgtcgattttaccggtaagtttatttattacgttggcccagtcgatcca
gtcggtgatgaagtggttggccctgcaggcccaacaacggcaacccgtatggataagttc
actgacatgatgttagaccaaacaggcctaatgggcatgattggtaagtctgagcgtggt
cctgaaacggttgcttcaattaaaaagcacaaagcagtctatttaatggctgttggcggc
gctgcatacctagtgtcgaaagcgattaagaaatcacgtgttgtcgcatttgaagattta
ggcatggaagcgatttacgaatttgatgtgcaagacatgccagtgaccgtggcggttgat
accaatggtgttaatgcgcacgaaactggcccagcgatttggaaaattaacatcgctaac
agtaaagctaataagtaa

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