Shewanella frigidimarina: Sfri_0289
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Entry
Sfri_0289 CDS
T00395
Name
(GenBank) Sel1 domain protein repeat-containing protein
KO
K07126
uncharacterized protein
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Sfri_0289
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Gene cluster
GFIT
Motif
Pfam:
Sel1
DUF4145
TPR_27
DUF3798
TPR_2
TPR_16
TPR_1
HGD-D
RNF111_N
ANAPC3
TPR_19
Motif
Other DBs
NCBI-ProteinID:
ABI70152
UniProt:
Q089B3
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Position
318154..319662
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AA seq
502 aa
AA seq
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MLNDIEFINGFSTELSDDYRLAKSYVRDIPTQALVYIRSFTHKLAAQLAVQHGVTFTSAN
LYDRIEQLNQRRVIDVAAVRALHRLRSDGNRGAHPEKYHLTQTQLVNIAEKSIHQILQVI
EKLYPSLHPGVAPHYQFEAFDSFAGRDLCYRAVMKNDPEAQYLVGMSLKAKGLMLQEQER
ALAQTTDDSLLASSNSSSASSSSTSSSSNSAESNTPSLISTTVEQTSADVFAQAAHWFHI
ASAHHQAALFEHGVSLLHGYSGAENPATGEAFIAQAAAQGIVNAQALLGFFYLVGSDQFE
VDINQAETLLTLAANAEDAEAMSNLGVLFYQNQQFEQAYLWINKAAQTGYPHAQYHLALM
LEQGEGCQIDLATSQQWMQEAAEQGQLDAMLRCSSDILHDDDASQEQLNIAEHYLHEVIK
YGRNVTAMIELSVALADGILGRIDVVQAAYLLQQANLHANEIQRQVIEPLWQSLQMQIDS
VIALNPTEDELATLQQAKCLLA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatgatattgagtttattaatggtttctctactgagttaagcgacgattatcgt
ttagctaaaagttatgtacgcgatattcctacccaagcgttagtctacattcgaagcttt
acccataaactcgccgctcaattagcggttcagcatggagtaacgtttacctcagcaaac
ttatatgatcgtattgagcagctgaatcagcgacgtgttattgatgttgccgcagtgcgg
gcgttacaccgattacgcagtgatggtaatcgcggcgcacatcctgaaaaatatcattta
actcaaactcagcttgttaacatcgcggaaaagtcgatccatcaaattctgcaggtaatt
gaaaaactatatccctctctgcatccaggtgttgctccgcattatcaatttgaagcattt
gattcatttgctggccgcgatttatgttatcgcgcagtgatgaaaaatgatcctgaagca
cagtatttagtggggatgtctcttaaagccaaaggattaatgctacaagagcaagagcgc
gcgttggcacaaaccactgacgattcactcttagcaagttcaaattcaagttcagcatca
tcaagctcaacatcctcaagttcaaattcagctgaatcaaacactccaagcctaatatca
accacggttgaacaaacgtcagcggatgtatttgcccaagcagcacattggtttcatatt
gcatcagctcatcatcaagcggcattgtttgagcatggtgtgagcttattgcacggctat
agtggtgcggaaaatcctgcgacgggcgaggcgtttattgcgcaagctgcagcacaaggt
attgttaatgcgcaggccttgttaggtttcttttatctggtgggcagtgatcaatttgaa
gtggatattaatcaagccgaaacattgctgacattagccgctaatgcagaagatgctgaa
gcaatgtcaaaccttggggtgctgttttatcaaaaccaacaatttgaacaagcttactta
tggataaataaagcagcgcaaaccggttacccgcatgcacaatatcatttggcactgatg
cttgaacaaggtgaaggatgccaaattgatctcgctacgagccaacaatggatgcaagaa
gccgccgaacaaggtcagttggatgcgatgttacgttgcagcagtgatatcttgcacgat
gatgacgctagccaagagcaacttaatattgctgaacactatttgcatgaagtgattaaa
tacggccgtaatgtcaccgcgatgattgaactgagtgtcgccttagccgacgggatttta
ggccgtatcgatgtggtacaagcagcatatttactacaacaagctaatttgcacgccaac
gagattcagcgccaggtcatcgagccgctttggcagtcgttacagatgcaaattgacagt
gtgattgcgcttaatccaacggaagatgagttagctaccttgcaacaggcaaagtgctta
ctcgcgtaa
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