Shewanella frigidimarina: Sfri_0308
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Entry
Sfri_0308 CDS
T00395
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_0308
Transporters [BR:
sfr02000
]
Other transporters
Pores ion channels [TC:
1
]
Sfri_0308
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
BON
DUF2633
Motif
Other DBs
NCBI-ProteinID:
ABI70171
UniProt:
Q088Z4
LinkDB
All DBs
Position
complement(337046..338425)
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AA seq
459 aa
AA seq
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MICRFLLNSFPRSNQRSSSRLNRWILLWSLVIAVVCLTSFVPTDAQAAPSPDTVKQLIQI
NDPSSVIDIEIQGSVVHLNGSVTEQASKERILQTIAALPDVTQVVDNIHLQPIAPLSLAP
LQQDAEQFWDKALLYLPRLALGLSIFLLLFWLSHPLARLLISPLAWVTKSELIRLVMQRS
ISVLIILLGLYIFLRLAGLTQFAVAIISSTGVIGLILGFAFKDIAENFISSLLLSVQRPF
KLGDVISVEGNLGVVKQVTARATTLVDYDGNHIQIPNATIYKNVIKNLTANPRMRGHFVI
GIGYDASIRKAQDIAMEIMSDHHGVLADPEPQVLIKNLGPSTINLQVYFWVNAETHSVPK
VASILMRLLVRAYEANQISLPDDARERIFPQGIQLVTNGHPQDETPLNTIQSTEHNSNKA
QESLEDTHNETSDDISSDTDDIRQQAAQSRDPESGANII
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtcgatttttgttaaacagctttcctcgcagcaaccagcgatcatcctcaagg
ttaaatcgatggattctactatggagtttagttattgctgttgtttgccttaccagcttt
gtgcctactgatgcccaggctgcgccctcgcctgatactgtgaaacaactcatacagatt
aacgacccaagcagcgtcatagacattgaaatacaaggctctgtcgtccacctaaacggc
tccgtcactgagcaagcgagtaaagagcgcatactgcaaaccatagccgctttacctgat
gtgactcaggttgtggataatattcacttgcaacctattgcgcccttatctttagctccc
ctgcaacaggatgctgagcaattttgggacaaagccttactctatttaccgcgtttggct
ttagggctgtcgatattcttgctgctattttggctttctcatcctttagcacgcttattg
attagtcccttagcttgggtaacaaaaagcgagttgattcgattagtgatgcagcgcagc
atcagtgtattgatcatcttattgggactgtatatatttttgcgcctcgctggcctaacg
cagtttgcggtcgcgattattagcagcactggtgtaatcggtctgattttaggttttgcc
tttaaagatatcgccgaaaactttatttccagcttactactcagtgtgcagcgtccgttc
aaattaggggatgtaatatccgttgaagggaatttgggggtggtaaagcaagtcacagca
agggctaccacgttagtcgactacgacggaaatcatatccaaatccccaatgccactatc
tataaaaacgtgattaaaaatcttactgccaacccgagaatgcgtggccattttgtcatt
ggcattggttatgatgcaagtatccgtaaggctcaggatattgctatggagattatgagc
gatcatcacggcgtactcgcagatcccgagccacaggtattaataaaaaaccttggtcca
tcgacgattaatctgcaagtgtatttttgggtcaatgctgaaactcacagtgttccaaaa
gtggcttcaattttaatgcgcttgctggtgcgcgcttatgaagcaaatcagataagcttg
ccggacgatgcccgcgaacgtattttccctcaagggatacaattagtcaccaacggacat
ccgcaagatgaaacacctctgaatacgatacagagcactgagcacaacagcaacaaagcc
caagagtcattagaagatacccataatgagactagcgatgacatcagcagcgataccgat
gatatacgtcaacaagcggcacaatcacgagatcctgaaagtggcgccaatattatctaa
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