Shewanella frigidimarina: Sfri_0357
Help
Entry
Sfri_0357 CDS
T00395
Name
(GenBank) two component transcriptional regulator, LuxR family
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
sfr
Shewanella frigidimarina
Pathway
sfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sfri_0357
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sfr02022
]
Sfri_0357
Two-component system [BR:
sfr02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
Sfri_0357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
HTH_40
HTH_29
HTH_10
Phage_terminase
HTH_24
HTH_68
DUF6115
TnsD
Motif
Other DBs
NCBI-ProteinID:
ABI70220
UniProt:
Q088U5
LinkDB
All DBs
Position
complement(385696..386304)
Genome browser
AA seq
202 aa
AA seq
DB search
MKILLAEDQAMVRGALAALLTLACDSLNEIEIVEVEDGDKAMQQLKTDSFDLLLTDIEMP
GKSGLELSQWLQQQRSQTKVIILTTFGRAGYIKRALEYGVGGFLLKDAPSEDLINAIKQV
MAGKRVIDPELAFTAIGEIDPLNDKERRALRLASEGLSTSDIASQLFIAEGTVRNYLSEA
ISKLNASNRIDAARIAKQKGWL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctattagccgaagatcaagctatggtaagaggcgccctcgccgcgttgctc
acattagcgtgtgatagcctaaatgaaatagagattgtcgaagtcgaagacggcgataaa
gcgatgcaacaacttaaaacagattcatttgacctgttacttaccgacattgaaatgccg
ggtaagtcaggtttagagctgagccaatggttacaacaacagcgcagccagaccaaagtg
attattttgaccacctttggccgagccggttatatcaaacgagcattagaatacggtgtc
ggtggttttttattaaaagacgcaccgtctgaagacttaattaatgcgattaaacaagtg
atggcgggtaaacgagttatcgatccagaattagccttcaccgctattggtgaaatagat
cctctcaacgacaaagaaagacgtgcattgcgcctagcaagcgaaggcttatcaactagc
gatattgccagtcagttgtttattgcagaaggcacagtacgaaactatttgtcagaagcc
attagtaaactcaatgccagtaaccgaattgatgcagccagaatagccaagcaaaagggt
tggttgtaa
DBGET
integrated database retrieval system
