Shewanella frigidimarina: Sfri_0363
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Entry
Sfri_0363 CDS
T00395
Name
(GenBank) (p)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00230
Purine metabolism
sfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Sfri_0363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfr03009
]
Sfri_0363
Enzymes [BR:
sfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
Sfri_0363
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
Sfri_0363
Ribosome biogenesis [BR:
sfr03009
]
Prokaryotic type
Other maturation factors
Sfri_0363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
ACT_AHAS_ss
ACT
Motif
Other DBs
NCBI-ProteinID:
ABI70226
UniProt:
Q088T9
LinkDB
All DBs
Position
complement(391759..393867)
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AA seq
702 aa
AA seq
DB search
MYLFEGLKESASSYLEPDQVELLKQAYLVARDAHEGQMRTSGEPYITHPVAVSRILADMR
LDHESLMAALLHDTIEDTPVTKEELTELFGVAVAELVEGVSKLDKIKFRDRKEAQAENFR
KMMMAMTQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYAPIANRLGIHNIKI
ELEDLGFQAYYPMRHRVIRDVVKAARGNRKELINSIEVAIETRLEEAGIPTKVKGREKNL
YSIYRKMRSKELQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKA
NGYQSLHTSLFGPHAVPVEVQIRTEEMDQMADKGVAAHWMYKNNTDTAQQSTSQVRAHKW
MQSLLELQQSASSSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVG
NTCVGARVNRQAYPLSQPLISGQTVEIITAKGARPNAAWLNFVVTGKARGKIRQVLKSLK
GDNAIALGKRLLNHALGDTKLETIPAELLEKVIKETKHTSLDSLLADIGLGNAMSIVIAQ
RLVGEQFDSQDSNKEKPQMPIRGAEGMLVTYANCCRPIPGDAVIAHVSPGKGLVVHMESC
ANIRGYQGEPDKYISVHWDNVEGAEYQANLRVEIVNHQGALAKITSIIASAGSNIHNLST
EERDGRVYLINLRISVKDRVHLANVMRRIRVLPEVLRTSRNR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttgtatctgtttgaaggtctaaaagagtcagcatccagctatttagagccggatcaagta
gaattactcaagcaggcctatttggttgcgcgtgatgcccacgaagggcaaatgcgcaca
agtggcgagccttacattacccatccggttgcggttagccgcatcttggcagacatgcgt
ctcgatcacgagtcgcttatggctgccttgcttcatgacaccatcgaagatactcctgtc
accaaagaagaactcacagagttatttggggtggcggttgcagaactggtggaaggtgtt
tcaaaacttgataaaatcaagtttcgtgatagaaaagaagcccaagcggaaaatttccgt
aaaatgatgatggcaatgactcaagatattcgagttatcctcatcaagttggcagaccga
actcacaacatgcgcacactgggctcacttcgccctgataaacgtcgtcgtattgctcgc
gaaaccctagaaatctacgccccaattgctaaccgattaggtattcacaatatcaaaatc
gaacttgaagacttaggttttcaagcctattaccctatgcgacatagagtgatacgtgat
gttgtcaaagcagctcgtggtaatcgtaaagaattaattaacagtattgaagtggccatt
gaaacacgccttgaagaagctgggatccccactaaagtcaaaggtcgtgaaaaaaacctc
tattcgatttatcgaaaaatgcgcagtaaagaactgcaatttcaagaggtcatggatatc
tatgcgttccgagttatcgttgactctattgatacctgctatcgcgtgctcggcgctatg
cacggattatacaagccgcgaccaggacgttttaaagattatatcgctattcccaaagcc
aacggttatcaatcattacacacatcattatttggccctcatgcggttcctgttgaagtg
caaattcgcactgaagaaatggatcaaatggccgacaaaggtgttgctgcgcattggatg
tataaaaacaataccgatacggctcaacaaagcacttctcaagttcgtgctcataaatgg
atgcaaagtttgcttgagttacagcaaagtgcaagcagctcatttgaatttgttgaaaac
gttaaaactgaattattccctgaagaaatctacgtatttacgccagaaggtcgcatctta
gaattaccggtcaatgccactgccgtcgattttgcctacgaagtacatactgatgttggc
aatacctgtgttggcgcacgcgttaatcgtcaagcatacccgttgagccaaccattaatt
tctgggcaaacagttgaaattattaccgccaaaggtgctcgtcctaatgcagcatggtta
aactttgtcgtaacgggtaaagctcgtggtaaaattcgtcaggtattaaagagtcttaaa
ggcgataacgctatcgcattaggtaagcgtttattaaaccatgccttaggtgatacaaag
cttgaaaccattcctgccgaattacttgagaaagtgatcaaagaaaccaaacacacatct
ttagactcgctgctagcagatattggcttaggcaatgccatgagcattgtgattgcccag
cgcttggtaggtgagcagtttgattcgcaagatagcaataaagaaaaaccacaaatgcca
attcgtggtgctgaaggtatgttggtcacttacgccaattgttgtcgcccaatccctggc
gatgctgtcatcgcccatgtaagcccaggcaaaggcctggtagtgcacatggaaagttgt
gccaatattcgcggctatcaaggcgagcctgataagtatatttcagtacactgggacaac
gtagaaggcgcagaataccaagcaaatctacgggttgaaattgtaaaccatcagggtgcg
ttagctaaaatcacgtctatcatcgcatcagctggatctaatattcacaatctcagtacc
gaagaacgtgatggccgtgtgtatttgattaatttacgtatttcagttaaagatcgtgtt
catcttgcaaacgttatgcgcagaatacgtgttttacctgaagtattacgcacatcgcgt
aaccgctag
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