Shewanella frigidimarina: Sfri_0364
Help
Entry
Sfri_0364 CDS
T00395
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sfri_0364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfr03021
]
Sfri_0364
03400 DNA repair and recombination proteins [BR:
sfr03400
]
Sfri_0364
Enzymes [BR:
sfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sfri_0364
Transcription machinery [BR:
sfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sfri_0364
DNA repair and recombination proteins [BR:
sfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sfri_0364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1599
Motif
Other DBs
NCBI-ProteinID:
ABI70227
UniProt:
Q088T8
LinkDB
All DBs
Position
complement(393881..394159)
Genome browser
AA seq
92 aa
AA seq
DB search
MARVTVEDAVNKIGNRFDMILVAARRARQIAVQGKEPMVDEMNDKPTVVALREIELGLVT
SNTLDADERQTVREREAAEIAAVAAIAEGRVL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaactgtagaagacgccgtaaataaaatcggcaaccgttttgatatgatc
ctggttgcagcgcgtcgtgcacgccaaatcgccgtccaaggtaaagaacctatggttgat
gagatgaatgataaaccaacggttgtcgctttacgtgaaatcgaattaggtttagtcacc
tcaaacactttagatgctgatgagcgccaaactgttcgtgaacgtgaagctgctgaaatt
gccgctgtcgcagccattgcagaaggccgcgttttataa
DBGET
integrated database retrieval system
