Shewanella frigidimarina: Sfri_0390
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Entry
Sfri_0390 CDS
T00395
Name
(GenBank) Protein of unknown function UPF0011
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfr03009
]
Sfri_0390
Enzymes [BR:
sfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Sfri_0390
Ribosome biogenesis [BR:
sfr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sfri_0390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
ABI70253
UniProt:
Q088R2
LinkDB
All DBs
Position
419447..420289
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AA seq
280 aa
AA seq
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MDQMVALYIVPTPIGNFGDISARAIEVLQQVDLIACEDTRHSGRLLSHFGIETRKTALHD
HNERDRAQWIVEQLNEGKSIALISDAGTPLISDPGYHLVNHVRQAGHRVVPLPGACAAIT
ALSASGLPSDRFSFEGFLPSKEKARIDKLEFLKEDPRTLIFYESPHRILYSLAAIVDVLG
ADRQVVMAREVTKTFETFLSGTAAEVLALVEADDNQQKGEMVIMCHGFTLSDEEGIPAVA
VATLKLLCEELPLKKAAAIAGQIHGLKKNALYKYGLELDL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaatggtcgcgctgtatattgttcccaccccaattggtaattttggcgacatc
agcgctcgagcaatagaggtgctgcaacaggttgatttaatcgcctgtgaagacacacgc
cacagcggaaggttgctgagccactttggtattgaaacccgtaaaacggcattacatgat
cataatgaacgtgatcgagcgcaatggatagttgaacaattaaatgaaggcaaatcaatc
gcgctcatttctgacgcgggtacgccgttaatttcagaccctggctaccatttagttaac
catgttcgtcaagctggccacagagtcgtgcctttgcctggagcatgtgcagcgataaca
gccttaagtgcatcaggattaccgtctgatcgttttagttttgaaggttttttaccctca
aaagaaaaagcccgtatcgataaacttgaatttcttaaagaagatcctcgtactttgata
ttttacgaatctcctcaccgcatactttatagccttgccgctattgttgacgttttaggc
gccgataggcaagtggtaatggcacgtgaagtcactaaaaccttcgaaaccttcttatct
ggcaccgctgcagaggtattagcgctggttgaagctgatgataatcaacaaaaaggcgaa
atggtcattatgtgccatggctttacattatctgatgaagaagggattccagcagttgca
gttgctacgctaaagttactttgtgaagaattaccgcttaaaaaagctgccgctatagca
gggcaaatccatggtttaaagaaaaatgccctatataaatacggtttagaactggattta
taa
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