Shewanella frigidimarina: Sfri_0425
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Entry
Sfri_0425 CDS
T00395
Name
(GenBank) L-threonine ammonia-lyase
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00260
Glycine, serine and threonine metabolism
sfr00290
Valine, leucine and isoleucine biosynthesis
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr01200
Carbon metabolism
sfr01230
Biosynthesis of amino acids
Module
sfr_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sfri_0425
00290 Valine, leucine and isoleucine biosynthesis
Sfri_0425
Enzymes [BR:
sfr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
Sfri_0425
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Gene cluster
GFIT
Motif
Pfam:
PALP
Thr_dehydrat_C
DUF3970
UPF0180
Motif
Other DBs
NCBI-ProteinID:
ABI70287
UniProt:
Q088M8
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Position
465201..466772
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AA seq
523 aa
AA seq
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MLALASQTQLDLAHYYLQKILLSSVYDVAKVTPLSSMNKLSARFGCQVYLKREDMQPVHS
FKLRGAYNRIAALTQDECNKGVVCASAGNHAQGVAMSAASRGIDAIIVMPSTTPDIKIDA
VKRLGGTVVLHGQAFDQANDYAKNLSATEGRVYIAPFDDEAVIAGQGTIAQEMVQQQRDI
EIVFVPVGGGGLIAGIAAYYKAVMPQVRIIGVEPEDAACLKAALEADEPVTLAQVGLFAD
GVAVKRIGTEPFRLAREYVDEVITVTSDEICAAVKDIFEDTRAIAEPAGALSIAGLKKYM
AQQGDSIDAPKKVAAILSGANVNFHSLRYVSERCELAEQKEAVLAVKIPEKPGSFLRFCE
LLDKRVMTEFNYRFSSRDIAVVFAGIRLTGGQAELSEIIAKLESEGFEVQDLSQDETAKL
HVRYMVGGHPLEPLEERLFSFEFPEHPGALLKFLTTLQSKWNISLFHYRNHGAAFGRVLT
GFEVPAKDDVAFAQFLTELGFVYQEETHSPAYKLFLNSTKAKS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgttggctttggcgtctcaaactcaattagatttagcccactattatttacagaaaatt
ttactatcgtctgtatatgatgtggctaaagtgacgccactgtcgagcatgaataaattg
tctgctcgctttggttgtcaggtgtatttaaagcgtgaagacatgcaaccagtgcattcg
tttaagttacgtggggcttataaccgtatcgctgccttgactcaagatgaatgtaataaa
ggcgtagtgtgtgcatcggcgggtaaccatgctcaaggtgtggcaatgtctgccgccagc
cggggtattgatgcgattattgttatgccaagtaccacgcccgatattaaaattgatgca
gtaaagcgcttaggtggcacggtagtgttacacgggcaggcgtttgatcaagccaatgat
tatgcaaaaaatctgtcggcaacagaagggcgtgtttatatcgctccttttgatgacgaa
gcggttattgcaggccaaggcacaattgctcaagaaatggtgcaacagcagcgtgatatt
gaaattgtgtttgtacccgttggcggtggtggattaattgccggtattgctgcgtattat
aaagcggtcatgccacaagtgaggatcattggggttgaacccgaagatgccgcttgttta
aaggcggcattagaagccgatgaaccagtgacactggcccaagtcggtttgtttgctgac
ggcgtagcggttaaacgcattggtactgagccatttaggttagcgcgtgaatatgttgat
gaagtgattacggttacttctgatgaaatttgcgcagcggttaaagatatttttgaagat
acccgtgcaatagcagaaccggcaggggccttgtcaattgctgggcttaaaaagtacatg
gcgcaacaaggtgactccattgacgcgccgaaaaaagtagcggctatattgagtggcgcc
aatgtgaattttcatagtttacgttacgtgtctgaacgctgtgaattagctgagcaaaaa
gaagcggttttagcggtaaaaatacctgaaaaaccaggcagttttttacgtttttgcgag
ttactcgataaacgggtgatgaccgagtttaactaccgttttagtagccgtgatatagca
gtggtgtttgcgggtattcgtcttactggtggccaagcggagctaagtgagattattgct
aaacttgagtctgaaggctttgaagttcaagatttatcccaagatgaaaccgctaaacta
catgtgcgttatatggtcggcggtcacccactcgaacctttagaagaacgcttatttagc
tttgagtttcctgagcatccaggggcattgctgaagttcttaaccactttacagagtaaa
tggaatattagtttatttcattaccgtaaccatggtgcagcctttggtagggtgttaacg
gggtttgaagttccggctaaagacgatgtggcgtttgcacagtttttaacggagctaggt
ttcgtttatcaagaagaaacccacagtccggcatataagctctttttaaatagcactaaa
gcaaaatcgtaa
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