Shewanella frigidimarina: Sfri_0583
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Entry
Sfri_0583 CDS
T00395
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sfri_0583
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfr01007
]
Sfri_0583
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_0583
Enzymes [BR:
sfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Sfri_0583
Amino acid related enzymes [BR:
sfr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Sfri_0583
Transfer RNA biogenesis [BR:
sfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sfri_0583
Prokaryotic type
Other AARSs
Sfri_0583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABI70444
UniProt:
Q087X1
LinkDB
All DBs
Position
677097..678599
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AA seq
500 aa
AA seq
DB search
MTEHVQDENKLIAERRAKLEHIRTNCPANAHPNTWQRSHKAAELQAQYGEQTKEALEELA
FQTSIAGRVMAKRGPFLVIQDVSGRIQAYAGKPVQGDLKERYQGLDIGDIIGVKGQLHLS
GKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVV
AAIRNFMVKKEFMEVETPMMHVIPGGASARPFVTHHNALDMAMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLGSIAQELLGSTSM
PYGEETVEFGGAYARLSMLEAIQKYNPDNATIQAMTYEQVKDVEFMRDLASSLGIKLEKF
WTCGQLLEEIFGETAETKLMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVAN
GFSELNDAEDQDNRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacacgtacaagatgaaaacaaactgattgctgaacgtcgcgctaaattagaa
cacattcgcaccaactgtcctgcgaatgctcatccaaatacatggcagcgtagtcataaa
gcggctgagttacaggcacaatatggcgagcaaactaaagaagcgctagaagagttagct
tttcaaaccagtattgctggccgtgttatggcaaagcgtggtccatttttagtgattcaa
gacgtgtctggtcgtattcaagcttatgctggtaagccagtacaaggcgatttaaaagag
cgttatcaaggtttagacatcggtgacatcattggtgttaaaggtcagctgcatttatct
ggcaagggcgacttatacgttaatatggaagaatatcagttactgaccaaagcattgcgt
ccgttacctgaaaaattccatggtttaacagaccaagaaactcgctaccgtcagcgttac
gttgatttgatcgttaacgaagattcgcgcaatgcctttattatgcgctctaaagtggtt
gccgcaatccgtaactttatggtcaaaaaagagttcatggaagttgaaaccccaatgatg
cacgttattcctggtggtgcttctgcgcgtccatttgtaacgcatcacaatgcattagac
atggctatgtacttacgtatcgcgccagagctgtaccttaagcgtctagtggttggtggt
tttgaacgtgtattcgaaattaaccgtaacttccgtaacgaaggtttgtcaccacgtcat
aacccagaattcaccatgatggaattctatatggcgtatgctgattacaaagacctaatg
gacttaaccgaagaaatgctggggtcaattgctcaagaattattaggcagtactagcatg
ccgtatggtgaagaaactgttgagtttggtggcgcttatgctcgtttaagcatgttagaa
gcgattcagaaatacaatcctgacaatgcgactattcaagctatgacctacgagcaagtt
aaagacgtagagtttatgcgcgacttagcatcgagcctaggcatcaagttagagaaattc
tggacttgtggtcaattacttgaagaaatcttcggtgaaactgctgaaactaagttaatg
caacctacgttcattactggctacccagctgatatttcacctttggcgcgtcgtaatgat
aacaatgacttcattaccgatcgttttgagttctttatcggtggccgcgaagtggctaac
ggctttagtgagcttaacgatgctgaagatcaagacaaccgctttaaagcgcaagttgat
gcgaaagatgctggcgatgacgaggcgatgttctatgacgctgactacattacagcacta
gagcacggtttaccaccaacagcaggtcaaggtattggtatcgaccgtttagtgatgcta
ttcactaacacgcatactattcgcgacgtgattttattcccagcgatgcgcccacaagcg
taa
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