Shewanella frigidimarina: Sfri_0630
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Entry
Sfri_0630 CDS
T00395
Name
(GenBank) ABC transporter related
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
sfr
Shewanella frigidimarina
Pathway
sfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sfri_0630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_0630
Transporters [BR:
sfr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Sfri_0630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
AAA_21
ABC_ATPase
AAA_24
RsgA_GTPase
Zeta_toxin
DUF87
Septin
AAA_15
MMR_HSR1
Roc
Motif
Other DBs
NCBI-ProteinID:
ABI70490
UniProt:
Q087S5
LinkDB
All DBs
Position
733662..735455
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AA seq
597 aa
AA seq
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MRPSAYFEGPVGKLNWHVLRLLWPYLLEFKARVLLAMICLIVAKIASVGLPFILKELVDT
LDKQSAAQIIAVPIGLVLAYGMVRLLNVIIGEIRDTLFGRVTERAIRRLGRAVFEHLHRL
DLDFHLDRRTGGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIALVIGIFFYNYGVSFALI
TLFSVVAYIGYSIVATEWRTGYVRDAARADSLANTRSIDSLLNYETVKYFNNEEFESQRY
DSALEQWEVAKRKNRLSLFALNGGQALIIAVAMTAMMGLAAYEVSQGSMTIGDFVLINAF
MMQLFIPLNFLGFVYREIRGALANIERMFDILAKQPQVLDHVDAIEASPTVGAIKFTDVS
FHYDQRAILNSVSFDVPAGKKIAVVGDSGAGKSTIIKLLFRFYDVDRGSITIDGIDVRQL
SQQALRRSIAVVPQDTVLFNDSIYENIRYGRSDATHDEIIAAIKLAHLSDFIESLPDKGN
TKVGERGLKLSGGEKQRVAIARAVLKGAPILVFDEATSSLDSRSEQAILSALRDAAKGHT
SLVVAHRLSTIIDADQIVVLSKGKIVEHGTHASLLAQQGLYARLWHIQHEQKDLANG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagaccttctgcgtacttcgaaggcccggtagggaagttaaattggcatgttttaaga
ttattatggccatatttattagaatttaaagcacgagtcttgttagccatgatttgctta
atcgttgctaaaatcgcgagtgttgggctgccattcattctgaaagaattagtcgacacg
ctggataaacaatccgcagcccagatcatcgccgtacctatcggattggtgctagcttat
ggtatggtccgtttgctcaatgtcattattggcgagatacgggatacgttatttggccgc
gttactgaacgagcaattcgccgccttggaagggctgtttttgaacatttacatcggctc
gatcttgattttcatttagatcgccgtaccggtggcctgtctcgcgatattgaacgtggc
accagtggcgtcagttttttaatgcgctttatggtatttaatattgtgccaacactgctt
gagattgccttagtgattggtattttcttttataactatggcgtcagttttgcattgatc
accttgttttctgtggttgcctatattggttattcaattgtggcaacagagtggcgcacc
ggttatgtgcgtgatgctgcaagagctgactcgctagctaatactcgttcaatcgatagt
ttgttaaattatgaaactgtaaaatattttaacaatgaagaatttgagtcacaacgatat
gattctgcacttgaacaatgggaagtggcaaagcggaaaaaccgcttatcattgtttgct
cttaacggtggtcaggcattaattattgctgttgctatgacggcgatgatggggctggct
gcttatgaagtgagccaaggctcgatgacaattggtgactttgtcctcattaatgctttt
atgatgcagctgtttattccattaaattttttaggctttgtttaccgcgaaatccgtgga
gcattagctaacattgaacgtatgtttgatattttagccaaacaaccacaagtgttagac
catgtcgatgcaattgaagccagtcccactgtcggagcgataaaattcaccgatgtaagc
tttcattacgatcaacgcgctattttaaacagtgtcagttttgatgtgccagcagggaaa
aaaattgccgtagtgggcgacagtggcgcaggtaaatcaacaatcattaaattgttattt
cgcttttatgatgttgaccgtgggtctatcactattgatggtattgatgtgcgtcagctt
agccaacaggccttaagaagatctatcgcagtggtaccgcaagataccgtcttatttaat
gattctatatatgaaaatattaggtatggtcgctcagatgcgactcacgatgagattatc
gcggcgattaagttggctcatttgagcgactttattgaatcattgccagataaaggtaat
accaaggtcggtgagcgaggattaaagctctctggcggcgaaaagcaacgtgttgctatt
gctagagcggtgttgaaaggtgcacctattttagtgtttgatgaagccacatcgtcatta
gattcacgctctgagcaagccattttgagtgctttgcgagatgcagcaaaaggtcataca
agtttagtggtagcccatcgtttatcgaccattattgatgcagaccaaatagtcgtattg
agtaaaggtaagattgttgagcatggaacacatgccagtttgttagctcaacaagggctt
tatgctcggctttggcatattcaacatgaacagaaagatttggcgaatgggtaa
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