Shewanella frigidimarina: Sfri_0663
Help
Entry
Sfri_0663 CDS
T00395
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfr03036
]
Sfri_0663
Chromosome and associated proteins [BR:
sfr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Sfri_0663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Integrase_1
HTH_33
Motif
Other DBs
NCBI-ProteinID:
ABI70523
UniProt:
Q087P2
LinkDB
All DBs
Position
773452..774369
Genome browser
AA seq
305 aa
AA seq
DB search
MDTALAKPVYQPDPLINQFLDDLWSTNGLSDNTLVSYRTDLQNAERYILTKGKDLLQVDQ
ALLRDYLAERFDKQFAKSSTARLLSSLRRFYAYLLVKQKISQDPTALIKSPKLVRQLPDT
LSEAQIDNLLSEPNIDDPIEHRDKAMLELLYATGLRVTELVSLTMEQISLRQGLVRVMGK
GGKERLVPLGELAITAVEQYIKFARAELLSMKQSDVLFPSRRGQMMTRQTFWHRIKLYAA
RAGIQCHLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAKVRLQQLHSQ
HHPRG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggataccgctttggccaaacctgtttatcaacccgatcctttaattaaccagtttctt
gatgatttatggtcaactaacgggctaagtgataataccttggtatcttatcgtacagat
ttacaaaatgcagaacgttacattttgactaaaggtaaggatttgctgcaagttgaccag
gccttactgcgtgactatcttgctgaacgttttgataagcaatttgctaaaagtagtaca
gcgagacttctcagtagtttacggcgtttttatgcttacttattagttaagcagaaaatt
agccaagacccgactgcattaatcaagtcacctaagctcgttcgccaattaccggataca
ttgtctgaagcgcaaatagacaatttgttatcagagccaaatattgatgatccgatcgag
caccgagataaagccatgttagagcttttgtatgccacagggctgcgggtgactgaattg
gtaagtttaacgatggagcagattagtttgcgccaaggtttagtgagggtgatgggtaaa
ggaggcaaagagcgtttggtccctttaggtgaactggccattacagctgttgagcagtac
atcaagtttgctcgtgctgaactattaagtatgaaacagtctgatgttttgtttccctct
cgccgtgggcaaatgatgaccagacaaaccttttggcatcgaattaaattgtatgcggcc
agagccggtattcaatgtcatctatctccacatacgttacgccatgcttttgctacccat
ttacttaaccatggcgcagatttacgtgtggtacaattgttactcggtcacagtgattta
tcgaccactcaaatttatacacatgttgctaaagtacgcttacagcaactacatagccaa
catcatccacgcggttag
DBGET
integrated database retrieval system
