Shewanella frigidimarina: Sfri_0666
Help
Entry
Sfri_0666 CDS
T00395
Name
(GenBank) putative lipoprotein
KO
K05807
outer membrane protein assembly factor BamD
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_0666
Transporters [BR:
sfr02000
]
Other transporters
Pores ion channels [TC:
1
]
Sfri_0666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfiO
TPR_18
TPR_6
TPR_2
ARM_TT21
TPR_19
Motif
Other DBs
NCBI-ProteinID:
ABI70526
UniProt:
Q087N9
LinkDB
All DBs
Position
complement(777913..778674)
Genome browser
AA seq
253 aa
AA seq
DB search
MYKIAKGAALVLLSLAITACSSSPEDDDVASKASPDVLYSQARTSMELGNYSKAVRSLEA
LDSRFPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVYYMRGLTNM
QADNYLFHDLMNIDRTDRDPKNAQDAFKDFDRLIKSYPNSKYSADAQQRMQFLKNRLAKY
SIQVAEYYIKMNAWSAAAVRAQSVMEKFPGTPSTERALEIMVKAYGELGQEKLQQNVKTV
MKANFPTNEVLSN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaattgccaaaggtgccgccctagtattactttcactggctataacagcctgt
agtagcagtccagaagacgatgatgttgccagtaaagcatcacctgatgtcctgtactct
caagcaagaacgtcaatggaattaggtaattactctaaagccgttcgttcacttgaagca
ttggattctcgttttccatttggtccgcacaaaactcaagttcaattagacttgattttt
gcgtattacaaaatggatgatgctgcctcaggacttgccaatattgatcgctttttacgc
ctcaatccaacgcatcctaatatagattacgtctattatatgcgtggtttaacgaatatg
caggcagataattacttatttcacgatttaatgaatattgatcgtaccgatcgtgatcct
aaaaatgctcaagatgcatttaaagattttgatcgattgattaaatcgtatccaaatagc
aagtattctgctgatgcacaacaacgcatgcagttcttaaagaaccgtttggctaaatat
tcaattcaagttgcagaatattatatcaaaatgaatgcatggagtgcagctgctgttcgt
gctcaatcagttatggaaaagttccctggaacaccatcaactgaacgcgcgttagaaatt
atggttaaagcgtatggcgaattaggccaggaaaaattacaacaaaacgttaaaaccgta
atgaaagcaaactttccaactaacgaagtattatctaactag
DBGET
integrated database retrieval system
