Shewanella frigidimarina: Sfri_0695
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Entry
Sfri_0695 CDS
T00395
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00550
Peptidoglycan biosynthesis
sfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sfri_0695
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfr01002
]
Sfri_0695
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Sfri_0695
Enzymes [BR:
sfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Sfri_0695
Peptidases and inhibitors [BR:
sfr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Sfri_0695
Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Sfri_0695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
ABI70553
UniProt:
Q087L2
LinkDB
All DBs
Position
complement(819811..821022)
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AA seq
403 aa
AA seq
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MMTSKTAQLTTMLFASVVCFSSLAATPQPDIRPTPNRAPMVTPDAPSVAAKAYVLMDYNS
GRVIAEENAYESLNPASLTKMMTSYVIGHEIRVGNISLDDDVAITKNAWAKNFPDSSKMF
IEVGKTVKVHDLNRGIIIQSGNDACVAMAEHIAGTEGAFVDLMNSWAKQLGMKDSYFENS
HGLDSENHKTTAYDMAILGAALIRDVPEEYKVYSEKSFTYNGIKQYNRNGLLWDKSLNVD
GIKTGHTSGAGYNLVSSGTSEGMRLISVVMGTSSESARKAESKKLLNYGFRFFETITPYK
AGDTFVTQQIWYGDRETVDLGVMTDTPITISRGKAKDLQANFELTKPLTAPLAKGETVGR
VFFQLDGKDIAQFPLVTLNEVQEGGLFSKLMDYFKQMFASWFE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttccaaaaccgctcaattaacaacgatgctctttgcatcagttgtctgtttt
tcttcactcgcagcaacgccacaaccagatatacgtcctacacccaatcgcgcacctatg
gtgacacctgatgcgccgagtgttgccgctaaagcttacgtgctaatggattataattct
ggcagagtcattgctgaagaaaatgcctacgaaagtttaaacccagcaagtctgacaaaa
atgatgaccagttatgttattggccatgaaatccgtgtcggtaatatttcattagatgat
gatgtagccattaccaagaacgcgtgggcaaagaatttccctgactcatctaaaatgttc
attgaagtgggtaaaaccgtcaaagtacacgacttaaaccgcggtattattatccaatcg
ggtaatgatgcttgtgttgctatggctgaacacattgctggtacagaaggtgcattcgtt
gatttaatgaattcatgggccaagcaattaggcatgaaggatagctactttgaaaactct
catggtttagactcagaaaatcataaaacgacagcttatgatatggccattttaggtgca
gcgctgatccgtgatgtacctgaagaatataaagtgtattcagagaagtcttttacctat
aacggcattaagcaatataaccgtaatggcttgttatgggataaaagcttaaacgttgat
ggtattaaaactggccatacatcaggtgcaggctacaacctagtatcttcaggcaccagc
gaaggcatgcgtcttattagcgttgtgatgggcacatcaagtgaatctgctcgtaaagct
gagagtaagaaactactcaactatggtttccgttttttcgaaactattacaccatacaaa
gctggcgataccttcgtaactcaacaaatttggtatggcgatagagaaacagttgatctc
ggtgttatgaccgacacccctattactattagccgtggtaaagcaaaagatttacaggct
aactttgagttaacaaagccactaactgccccacttgctaaaggcgaaacagttggtcgt
gtctttttccagcttgatggaaaagacattgctcagttcccgctagtgacattgaatgaa
gttcaagaaggcggcttattcagcaagttaatggattattttaagcaaatgtttgccagt
tggtttgagtaa
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