Shewanella frigidimarina: Sfri_0696
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Entry
Sfri_0696 CDS
T00395
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Sfri_0696
Enzymes [BR:
sfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Sfri_0696
Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Sfri_0696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
SpoIVA_ATPase
DUF7537
Motif
Other DBs
NCBI-ProteinID:
ABI70554
UniProt:
Q087L1
LinkDB
All DBs
Position
complement(821176..821988)
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AA seq
270 aa
AA seq
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MAINYRFILLIMLSSALLISCSSNDAKKTSSGKKSRYQMANDRYPDDAPDVSLVKNAQPK
YEPYSRQGNRNYTVLGKSYQVLDSGKGFKEQGHASWYGSKFHGHLTSNGETYDMYTMSAA
HKNLPLPSYVKVTNLDNNKQIIVRVNDRGPFHHGRVIDLSYAAAYHLGMLARGTAKVAIE
TVYIPSPEERVISDLKDDDNHFIQVAASQDKLRINMLAKQLETKYAVNSRVTSINGMHRL
QLGPIRQIHLTNKLLDRVQIDGYPQSFIVP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcaattaattaccgtttcatcttattaatcatgttgagcagtgcactactgatcagt
tgctcgtcaaatgatgctaaaaaaacctcttcagggaaaaaaagccgctatcaaatggct
aacgatcgttatcctgatgatgcaccagatgtgagcttggttaaaaacgcccaacctaaa
tacgaaccttatagcagacaaggtaatcgtaactacaccgtattaggcaaaagctatcaa
gtactcgacagcggaaagggatttaaagagcaaggtcatgcatcatggtatggttcaaag
tttcatggtcatttaacctctaatggcgaaacttatgatatgtacactatgtctgcagcg
cataaaaacctgcccttacccagttatgtcaaagtgaccaatttagacaacaataaacaa
attattgttagagtaaatgaccgcggaccgtttcatcatggtcgagtgattgatctatct
tatgctgctgcttaccacttaggcatgctggccagaggaaccgcaaaagtcgccattgaa
accgtttacattccctcaccagaagagcgagtaataagcgatttaaaagatgatgacaat
cactttattcaagttgcagcgtctcaagataaactgcgtataaatatgttggctaagcag
ttagaaaccaaatatgccgtgaattctcgcgtgacatcgataaatggcatgcacagattg
cagttgggcccgatcagacaaattcatctaactaataagttgctcgatcgtgtgcaaatt
gatggttatccgcaaagctttatcgtaccgtaa
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