Shewanella frigidimarina: Sfri_0713
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Entry
Sfri_0713 CDS
T00395
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_0713
Enzymes [BR:
sfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Sfri_0713
Transfer RNA biogenesis [BR:
sfr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Sfri_0713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Amdase
Motif
Other DBs
NCBI-ProteinID:
ABI70571
UniProt:
Q087J4
LinkDB
All DBs
Position
complement(837730..839154)
Genome browser
AA seq
474 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSSKMADLLDDYQGYTLTEDASEADVLLLNTCSIREKAQEKVF
HQLGRWKSLKDKNPNLIIGVGGCVASQEGKAIKDRAQCVDIIFGPQTLHRLPEMIEQIQR
GEKAVIDISFPEIEKFDRLPEPRADGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPLDD
VILEVAQLAAQGVREVNLLGQNVNAYRGATHDDEICTFAELLRLVASIDGIDRLRFTTSH
PIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTQMKRGHMAIEYKSIIRRLRKARPDI
QISSDFIIGFPGESKDDFADTMKLIEDVAFDHSFSFIYSARPGTPAADLPDDVSDEEKKQ
RLAILQDRITQQAMRYSRQMLGTVQRILVEGPSVKNPMELRGRTENSRVVNFEAAHTHIG
SFVDVKIVDVYTNSLRGEFVRGENEMDLRRSLRPAEILAKHKQDDALGVTHFKP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaacttcatattaagacctggggctgtcaaatgaatgagtatgactcatca
aagatggccgatttattagacgactatcaaggatataccttgaccgaagatgcgagcgaa
gcagacgtactgctgcttaatacttgctctattcgtgaaaaagcacaggagaaggtattc
catcagctagggcgttggaaatctttaaaagataaaaatcctaatttaattattggggtc
ggcggttgtgttgcctcacaggaaggtaaagcgattaaagatcgcgctcaatgcgttgat
attatctttgggccacaaacactgcatcgcttacctgagatgattgaacaaattcaacgc
ggcgaaaaagccgtgattgatatcagcttcccagaaattgaaaagttcgatcgtcttcct
gagcctcgcgctgatggtccaaccgcgttcgtatcaattatggaaggttgcagtaagtac
tgttctttctgcgtggtaccttatacccgcggtgaagaggtcagccgtccgttagatgac
gttattcttgaagtggctcaattagccgcccaaggtgtacgtgaagtgaatttattgggg
caaaacgttaacgcgtatcgcggtgcaactcatgatgatgagatatgtacctttgcggaa
ttattgcgcctagtggcctcaattgatggtatcgaccgtctgcgttttaccactagccac
ccaattgaattcacccaagacattatcgatgtgtatgaagacacgcctgaattggtgagc
ttcctgcatttaccggtgcaatcgggttcggatcgtattttgacccaaatgaaacgcggt
cacatggcgattgagtataagtcgattattcgtcgcttgcgtaaagcacgtccagatatt
caaattagctcagattttattattggtttccctggtgaatctaaagacgatttcgctgat
accatgaaactgattgaagatgttgcgtttgaccacagctttagctttatctacagcgct
cgtccaggtacgcctgcagcagatttgcctgatgatgttagcgacgaagaaaagaagcaa
cgtttagccattttacaagaccgtattacccaacaagcaatgcgttatagccgtcaaatg
ctgggcactgttcaacgtattttagttgaaggtccttcagtgaagaatccaatggaactt
cgcggtcgaactgaaaacagtcgtgtggttaactttgaagccgctcacactcatatcggt
agtttcgttgatgtgaaaattgttgatgtttataccaactcattacgcggtgaatttgtc
cgtggtgaaaatgaaatggatttacgtcgcagtttacgtccggctgaaattctggctaaa
cacaagcaagatgacgcattaggtgtgacccactttaagccgtaa
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