Shewanella frigidimarina: Sfri_0728
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Entry
Sfri_0728 CDS
T00395
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00541
Biosynthesis of various nucleotide sugars
sfr01100
Metabolic pathways
sfr01250
Biosynthesis of nucleotide sugars
Module
sfr_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Sfri_0728
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfr01005
]
Sfri_0728
Enzymes [BR:
sfr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Sfri_0728
Lipopolysaccharide biosynthesis proteins [BR:
sfr01005
]
Lipid A
Sfri_0728
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABI70586
UniProt:
Q087H9
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All DBs
Position
854482..855333
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AA seq
283 aa
AA seq
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MDQKIIQLSNNVQVANDKPFVLFGGMNVLESRDLAMSIAEHYVEVTQKLGIPYVFKASFD
KANRSSVNSYRGPGMEEGLRIFEEIKSTFNVPMITDVHEIHQCAPVAEVVDIIQLPAFLA
RQTDLVVAMAKTGAVINVKKPQFLAPHEMRHIITKFNEAGNDNIILCERGSSFGYNNLVV
DMLGMDEMKQTGYPVIFDATHALQRPGGRADSAGGRRAQATELARSGMALGLAGLFIEAH
PDPDNAKCDGPCALPLHLLEKYLTQMKAVDELVKSFEFIDTSK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaaattattcagttatctaataacgttcaagtcgctaacgataagccgttc
gtgttatttggcggtatgaatgtgcttgaatcgcgcgatttagcaatgtcgattgcggag
cattatgtggaagttacccaaaagcttgggattccatatgtgttcaaagcgtcttttgat
aaagcgaaccgttcatcggttaactcataccgtggaccgggtatggaagaaggtctacgt
atttttgaagaaataaaatcaacctttaacgtaccgatgatcaccgatgtgcatgaaatt
catcagtgtgcgccagtcgctgaagttgtcgatattattcagttacctgcattcttagcg
cgtcaaaccgatcttgttgttgcaatggcgaaaaccggtgcggtgatcaatgtgaaaaaa
ccacagtttctagcgccgcatgaaatgcgccacatcattaccaagttcaacgaagcgggt
aatgacaacattatcttatgtgagcgtggcagtagttttggttataacaacctcgtggtc
gacatgttaggcatggacgaaatgaagcaaacaggttatccggtgatttttgatgccacc
catgcactacaacgccctggtggacgtgctgattctgctggtggccgtcgtgcacaagcc
actgaacttgctcgtagtggtatggcattaggtctagcaggtctatttattgaagctcat
cccgatcctgataatgcaaaatgcgatggtccatgtgcactaccactgcatttattagag
aaatacctaacgcagatgaaagcggttgatgaattggttaaatcctttgagtttattgat
actagcaagtaa
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