Shewanella frigidimarina: Sfri_0843
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Entry
Sfri_0843 CDS
T00395
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfr03009
]
Sfri_0843
Enzymes [BR:
sfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Sfri_0843
Ribosome biogenesis [BR:
sfr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sfri_0843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABI70696
UniProt:
Q086W9
LinkDB
All DBs
Position
991393..992082
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AA seq
229 aa
AA seq
DB search
MRLDKFICESTELTRSLAKRALHRGDVTCDGVVVKNSGFKVLPQMAVHLDGTLISVIGER
YIMLNKPVDTICSTIDEEYPSVLSLIDIEKMDTLHIAGRLDVDTTGLVLITSDGQWSHKI
TSPKKDCGKRYWVELAEPIDDSLIQVFADGVELRNEDGLTKPALLDIIDSTHVRLTISEG
KYHQVKRMFAAVGNRVVNLHREAVGAIELNADLAAGEWRFLTDAEVKSV
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttagacaaatttatctgtgaaagtaccgaactaactcggtcattggccaagaga
gccttgcaccgtggtgatgttacctgtgatggtgttgtggtaaaaaattcaggttttaaa
gtactaccacaaatggcagtgcatttagacggtacgttaattagcgtgattggcgaacgt
tacatcatgttaaataaaccggtagacaccatctgttcaaccattgatgaagaataccca
tcagtattgagtttgattgatattgagaaaatggatactttgcacattgctggccgatta
gatgtcgacaccacaggcttagtgttaattactagtgatggtcagtggtcgcataaaatc
acttcgccaaagaaagattgtggcaaacgctattgggtggaattagccgaacctattgat
gacagtttaatccaggtatttgccgatggcgttgagctgcgcaatgaagatggactgact
aagcctgctttgctggatattattgactcaactcatgtacgattgacgattagtgaaggt
aagtaccatcaagttaagcgtatgtttgccgcggtgggtaatagagtggttaatttacat
cgtgaagcggttggtgctatcgagttaaatgctgacttagccgcaggtgaatggcgcttt
ttaaccgatgctgaagtcaagtctgtgtag
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