Shewanella frigidimarina: Sfri_0946
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Entry
Sfri_0946 CDS
T00395
Name
(GenBank) TRAP dicarboxylate transporter-DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
sfr
Shewanella frigidimarina
Pathway
sfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sfri_0946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_0946
Transporters [BR:
sfr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Sfri_0946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ABI70799
UniProt:
Q086L6
LinkDB
All DBs
Position
1105633..1106757
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AA seq
374 aa
AA seq
DB search
MSKVIQTCWILGLTLLLGCQQETPSKLSSVPQKDFISHQVIEWRLATSWPKNLPGLGMAP
ERFAQLVEQMSNGRLVITVYGAGELMPALSVFDGVSNGTIEMAHSASYYWKGKAPAAQFF
SSIPFGLNAQQMNAWLHYGGGMELWEEVYQPFGVLPLAGGNTGMQMGGWFNKIIASPEDF
KGLKMRLPGLGGEVLKKLGGVPVDALAGRELYGALQTGAIDAAEWVGPYNDLSLGLHQVA
KYYYYPGWHEPGSTMEFLINQQAFSTLPNDLKMIVKVAARAINQDMLDDYTQGHIAAMDV
LLNEHNVQVKLFPNTVIRALKYARDDVLNSEAAKDPLFNKVLESYMANEKSVKRYFSYTE
DALSRFELDDKNQP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggtgatacaaacctgctggatactaggcttaacgttattgttaggctgtcaa
caagaaacgccttcaaagctaagttctgttccgcaaaaagattttatttctcaccaagtt
attgaatggcgtttagccacgtcatggccaaaaaacttgcccggtttgggtatggctccg
gaacgatttgcccaattagtcgagcaaatgtctaacggtcgtttagtgattactgtttat
ggcgctggcgaattaatgcctgcattgtcggtgtttgacggcgtaagtaatggcacgata
gaaatggcccatagcgcatcatattattggaaaggtaaagcgcctgccgcccagtttttc
tcatcaataccatttggtttaaatgcacaacagatgaatgcatggcttcactacggcggt
ggcatggaattatgggaggaagtttatcaaccttttggtgtattaccgcttgcaggggga
aataccggcatgcaaatgggtggctggtttaataaaatcatagcatccccagaagacttt
aaagggctcaaaatgcgcttgccgggcttaggcggtgaggtgctcaagaagctcggtggc
gttcccgttgatgcacttgctggcagagaattatacggcgcactgcaaactggcgcaatt
gacgctgctgaatgggttgggccttataatgatttatcgctagggctgcatcaggtggct
aaatactactattatcctggctggcatgaaccgggttcaacgatggagtttttgattaac
caacaggccttttcgactcttcccaatgatttgaaaatgattgttaaagtcgctgcaaga
gccatcaatcaggatatgttagatgattatactcaaggtcatattgccgcgatggatgta
ttgcttaacgagcataatgtgcaagttaaactttttcccaacacagtgatccgcgcatta
aaatatgcaagagatgatgtgcttaacagcgaagcggctaaagacccgttattcaataaa
gtacttgagtcttacatggctaacgagaagtctgtaaagcgctattttagttacacagaa
gatgccttgagtcgctttgagttagacgacaaaaatcaaccgtaa
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