Shewanella frigidimarina: Sfri_0969
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Entry
Sfri_0969 CDS
T00395
Name
(GenBank) chaperone protein DnaK
KO
K04043
molecular chaperone DnaK
Organism
sfr
Shewanella frigidimarina
Pathway
sfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sfri_0969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfr03019
]
Sfri_0969
03110 Chaperones and folding catalysts [BR:
sfr03110
]
Sfri_0969
03029 Mitochondrial biogenesis [BR:
sfr03029
]
Sfri_0969
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfr04147
]
Sfri_0969
Messenger RNA biogenesis [BR:
sfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Sfri_0969
Chaperones and folding catalysts [BR:
sfr03110
]
Heat shock proteins
HSP70 / DNAK
Sfri_0969
Mitochondrial biogenesis [BR:
sfr03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Sfri_0969
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Sfri_0969
Exosome [BR:
sfr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sfri_0969
Exosomal proteins of breast cancer cells
Sfri_0969
Exosomal proteins of colorectal cancer cells
Sfri_0969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
SMBP
Motif
Other DBs
NCBI-ProteinID:
ABI70822
UniProt:
Q086J3
LinkDB
All DBs
Position
1130511..1132427
Genome browser
AA seq
638 aa
AA seq
DB search
MGKIIGIDLGTTNSCVAVLDGGKARVIENAEGDRTTPSIIAYTDDEIIVGQPAKRQAVTN
PTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIGADNGDAWVESRGNKMAPPQVSAEILK
KMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGI
DKKQGDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRMINYLA
DEFKKDQGLDLRRDPLAMQRLKEAAEKAKIELSSTNHTEVNLPYITADASGPKHLVVKIT
RAKLESLVEDLIQRTLEPLKVALADADLSISDINEVILVGGQTRMPKVQEAVTNFFGKEP
RKDVNPDEAVAVGAAIQAGVLSGEVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTK
AQQVFSTADDNQSAVTIHVLQGERKQASANKSLGQFNLEGIEPAPRGQPQVEVMFDIDAD
GILHVSATDKKTGKKQNITIKASSGLSDEEVEQMVRDAEAHADEDAKFEELVQARNQADG
LAHSTKKQVEEAGDALASDEKEKIEAAIATLETAIKGKDKEAIDTATQALIEASAKLMEI
AQAKAQGEAEGQAHDAGQEKPADDVVDAEFEEVKDDKK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaattattggtatcgatttaggcacaacaaactcgtgtgtagcagtccttgat
ggcggcaaagcacgcgtaattgaaaacgcagagggtgatcgtacaaccccatcaattatc
gcttataccgatgatgaaattattgtaggccaaccagcaaagcgtcaagctgtaactaac
ccaacaaacacattctttgccattaagcgtttaatcggccgtcgttttaaagatgacgaa
gtacaacgtgacgtgaacatcatgccattcaaaattatcggagctgataatggtgatgca
tgggttgaatctcgtggtaataaaatggcaccaccacaagtttcagctgaaatcttgaaa
aagatgaaaaagactgctgaagactttttaggtgaagaagtgactgaagcggttattacc
gttcctgcttactttaacgattcacaacgtcaagcaacgaaagatgctggtcgtatcgca
ggtcttgatgttaagcgtattatcaacgaacctactgctgctgcacttgcatacggtatc
gataagaagcaaggcgacaatattgttgcagtatacgatttaggtggtggtacattcgat
atctctatcatcgaaatcgacagtaacgatggcgaccaaacatttgaagtactagcaacc
aatggtgatactcacttaggtggtgaagactttgataaccgtatgattaactatttagct
gatgaattcaaaaaagaccagggcttagatcttcgtagagatcctttagcaatgcaacgt
ttgaaagaagcggctgaaaaagcaaaaatcgagctttcaagcactaaccacactgaagtt
aacttgccttacatcactgctgatgcatcaggtcctaagcatttagtggttaaaattact
cgtgctaagttagagtcattagttgaagatttaattcaacgtactttagagccgcttaaa
gttgcactagctgatgctgatttatcaatatctgatatcaatgaagtgattcttgttggt
ggccagactcgtatgcctaaagtacaagaagcagtaactaacttcttcggcaaagagcct
cgtaaagatgttaaccctgatgaagcggttgcagttggcgcggcgattcaggctggcgta
ctttctggcgaagtgaaagacgtacttctacttgacgttacaccactatctcttggtatt
gaaaccatgggcagtgtgatgaccaagcttatcgagaagaacaccactatcccgactaaa
gctcagcaagtattctcaacagctgacgacaaccaaagtgcagtgacaattcacgtactt
caaggtgagcgtaagcaagctagtgccaacaagtcattaggtcaatttaacctagaaggt
attgagccagcaccacgtggccaaccacaggttgaagtgatgttcgacattgatgctgat
ggtatcttacatgtgtctgcaacagacaagaaaacaggtaagaaacaaaatattactatc
aaagcttcttcaggtttgtctgatgaagaagttgaacaaatggtacgtgatgcagaagct
catgctgatgaagatgcgaaatttgaagagttagttcaagcgcgtaatcaagcagatggt
ttagctcattcaactaaaaaacaagttgaagaagctggcgatgcactagctagcgacgaa
aaagaaaagattgaagcggcaattgcaactttagaaactgccataaaaggcaaagataaa
gaagctattgatacagctactcaagcgttaatcgaagcgtctgctaagttaatggaaatt
gctcaagctaaagctcaaggtgaagcagaaggtcaagcacacgatgctggccaagaaaag
cctgctgatgatgttgttgatgctgagttcgaagaagttaaagacgacaaaaagtaa
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