Shewanella frigidimarina: Sfri_1002
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Entry
Sfri_1002 CDS
T00395
Name
(GenBank) deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00030
Pentose phosphate pathway
sfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Sfri_1002
Enzymes [BR:
sfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
Sfri_1002
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
NpmA
Motif
Other DBs
NCBI-ProteinID:
ABI70855
UniProt:
Q086G0
LinkDB
All DBs
Position
1172811..1173584
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AA seq
257 aa
AA seq
DB search
MTDLKKAAQRGIELMDLTTLNDDDTDQKVIDLCHKAKSPAGNTAAICIYPRFIPIARKTL
NELDCEDIKIATVTNFPHGNDDIAIAVLETRAAVAYGADEVDVVFPYRALMDGNETVGFE
MVKACKEECGDDAILKVIIESGVLKDPALIRKASELAIDAGADFIKTSTGKVPVNATLEA
AEIMLTVISEKNRNVGFKPAGGVRDAAQTAEFLDLAARILGDDWVTPQTFRFGASSLLNS
LLHTLELVDAPKPTSGY
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttaaaaaaagcggcacaacgtggtattgagttaatggatttaaccacttta
aatgatgatgatactgatcaaaaggtcatcgatttgtgccataaagccaagtctccagca
ggtaatactgccgcaatttgtatttaccctcgttttattcctattgcacgtaaaacatta
aatgaacttgattgtgaagacattaaaattgcaacagtgacgaattttccacacggtaat
gatgatattgccatcgcagtattagaaactcgtgcagcagttgcttatggtgcagatgaa
gtcgatgttgtgtttccataccgtgcattaatggatggtaacgaaactgtcggttttgaa
atggttaaagcgtgtaaggaagagtgcggcgatgatgcgattttaaaagttatcatcgaa
tctggtgtgctaaaggatcctgctttgatccgcaaagcatcagagttagctattgatgca
ggtgctgattttattaaaacatcaacgggtaaagtaccggtaaacgctacgcttgaagcg
gctgaaattatgttaactgtcatcagcgagaaaaatcgcaatgtaggctttaagcctgcc
ggcggtgttcgtgatgccgctcaaacagctgaatttttagacttggctgcgcgcatttta
ggtgatgattgggttaccccacaaactttccgttttggtgcttctagcttgttaaacagc
ttgttgcatacattagaattagtagatgctcctaagcctacttcaggttactaa
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