Shewanella frigidimarina: Sfri_1010
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Entry
Sfri_1010 CDS
T00395
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfr03400
]
Sfri_1010
DNA repair and recombination proteins [BR:
sfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sfri_1010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
AAA_22
DnaB_C
Lon_C
SLFN-g3_helicase
nSTAND3
AAA
AAA_16
AAA_18
ABC_tran
ATPase_2
AAA_14
NPHP3_N
cobW
AAA_19
AAA_30
MMR_HSR1
AAA_11
DUF5906
Rad51
Thymidylate_kin
TsaE
AAA_24
NACHT
CobU
NTPase_1
ATP-synt_ab
Zeta_toxin
AAA_28
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
ABI70863
UniProt:
Q086F2
LinkDB
All DBs
Position
1182995..1184374
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AA seq
459 aa
AA seq
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MAKAPKMAFVCDDCGLDYPRWQGQCRCGAWNSLVEMKLSASKSSTSRSSVLGYAGAVGGG
SKKLSEVESEDAEKRLTEIGELDRVLSGGLTTGSVNIISGDPGAGKTTLLSDLVARMSQS
MASLYCTAEESLSQFKNRVNRLKLNYNEDNLFLLSETSVEAIIEELEAKQIKFAVIDSIQ
AVVTDAANGSPGSPSQVKTAAQAFTQYCKKNNVTMFIIAHVNKNNEIAGPQTLVHIVDSL
LHIDTNDGQIRTLRANKNRFGDVDTVGIFRMSERGMISVDNPSEIFLSGSTTESPGSTIT
CIRKGNRNLLLEIQCLTTETESEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTFFNI
VGGLKIDESETCIDLALVTALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAA
QHGFTEIFIPFRNYHKTMEGLGAKIIPVKTIHELLELIN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagctccaaaaatggcatttgtttgtgacgattgtggccttgattatccgcgt
tggcagggacagtgtcgttgtggtgcgtggaattctttggtagaaatgaaattgtcagcc
tcaaagagttcaacttcacgatcatctgtattgggatacgctggtgcagtgggtggtggc
tctaaaaaactcagtgaagttgagtcagaagatgccgagaaaaggctcactgaaattggt
gagttagatagggtactaagtggcggtttgacgacaggatcggtgaatattatttctggc
gacccaggtgctggtaaaacaacattactatccgatttggtcgctcggatgtcacaatct
atggcttcactgtactgtactgccgaagagtcattatctcagttcaaaaaccgtgttaat
cgtttaaagcttaattacaacgaagataacttatttttgctgtctgaaaccagtgtagaa
gccattattgaagaattagaagccaagcaaatcaagtttgctgtcatcgactctattcaa
gcggttgtcaccgatgcagccaatggcagtccggggtcgccttcacaagttaaaacagcg
gctcaagcgtttactcaatattgtaagaaaaataatgtcaccatgttcattattgctcat
gtgaataaaaacaatgaaatagcaggcccgcaaaccttggttcatatcgtagattcattg
ctgcatatcgacaccaacgatggacagattcgtaccttacgcgctaataaaaaccgtttt
ggtgatgttgataccgtggggatattccgcatgagtgaacgcggtatgatcagtgttgat
aaccctagtgaaatatttttgtcgggctcaaccactgaatcgccaggctcaaccatcact
tgtattcgtaaaggtaaccgtaatttactgttggaaatacaatgtttaaccaccgagact
gaatctgagtttccacaacgtgtgtgtgtgggattaaacatgaatcggattaaaatgcta
accggtattttacgtaaacatactaaaaccaaaatttttcatgatacgttttttaatata
gtgggtggtttaaaaattgatgagtcggaaacctgcatcgatctagcgctagttacggca
ttactgagcagtttaaatgactttgtcgtgcctagaaccacttgtattatgggggagttg
agtttgaatggcgatgtgcgcccaattgatagtggtgtgccgagagtcaaagaagctgcg
cagcatggttttacagagatttttatcccattccgtaattatcacaaaaccatggaaggg
ctaggggcaaaaattatcccagtgaaaactatccatgagctgcttgaactaattaattaa
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