Shewanella frigidimarina: Sfri_1020
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Entry
Sfri_1020 CDS
T00395
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_1020
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sfri_1020
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
AAA
AAA_2
DUF815
Mg_chelatase
AAA_16
Microtub_bd
Kinesin
AAA_7
Pathogen_betaC1
nSTAND2
AAA_22
LMBR1
Motif
Other DBs
NCBI-ProteinID:
ABI70873
UniProt:
Q086E2
LinkDB
All DBs
Position
1197328..1198878
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AA seq
516 aa
AA seq
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MEITANDILNAKILIVDDQEPNVLLLEQLLLESGYTMVTTTMDPQVVCDLNRINNYDLIL
LDLQMPKMDGFEVMAALKADHSMDYLPVLVLTAQPNHKLQALQAGAKDFISKPFDLVEVK
TRIHNMLEVRLLYKKLEKNNITLEDIVQKRTVELTKTNLQLGLEIEERKKAEASLRDTYT
QIKQLKDKLQAENTYLQKEVARQFNFDEIIGSSKLLSQVFQKVEQVAPMHATVLLLGETG
TGKGVVARAIHSRSSRKKRPLITVDCTTLPVALIESELFGRERGAFTGSDSKQIGRFELA
DGGTLFLDEIGEMPLEMQAKLLRVIQDGEFERLGSPRTIKVDVRIIAATNRNLIEEVRNG
KFREDLYYRLNVFPITLPPLRQRKEDISLLVNHFLIKFNKKIGKQIDIITQDALNTLQQH
QWPGNVRELESAIERAVILSEGKSLQILDRFESFDKLATIEEPSMKALVELEYEHIVKVL
QQTGWRIEGNKGAALILGLNPSTLRARMRKQGITRQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcactgcaaacgatattcttaacgctaagattttgattgtcgatgatcaagag
cctaatgtgcttctgttggagcaattgctacttgaaagcggttataccatggtaactaca
accatggatccccaggttgtttgcgacctgaaccgaatcaataactatgatctgatcttg
cttgatctacagatgccaaaaatggatggatttgaagtcatggctgcgcttaaggccgac
catagcatggactatttaccagtgctggtgctcacagcccaacccaatcataaactgcag
gcattacaagcgggcgccaaggattttattagtaaaccctttgacttggtcgaagttaaa
acgcgtattcataatatgttggaagtgcgtttgttatataaaaaattggaaaaaaataac
atcactctagaagacattgtgcaaaagcgtacggtagagttgactaaaactaacctgcaa
cttggattggaaattgaggaacgtaaaaaggctgaagcgtcactgagagatacttataca
caaataaagcaattaaaggacaagcttcaggccgaaaacacttatcttcaaaaggaagtt
gcacggcagtttaatttcgacgaaatcatcggcagtagtaagctgttgtcgcaggttttt
caaaaagttgagcaagttgcaccaatgcatgcaaccgtgttactgcttggtgaaacaggc
accggtaaaggtgttgtggcccgcgccatccacagccggagttcacgaaaaaaacgcccc
ttaattacggtggattgcaccaccttgccagtggcgttgatagaaagcgaattgtttggc
cgagagcgtggcgctttcactggttctgatagcaaacaaatcggtcgttttgagcttgct
gatggcggcaccttattcctagatgaaattggtgagatgccgctagaaatgcaagctaaa
ctgctgagggttattcaagatggtgaatttgaacgtctaggaagtccccgcactataaag
gtcgatgtgagaattattgctgcgactaaccgtaacctgatagaagaagtgcgtaatggt
aagttccgcgaagatctttattaccgactaaacgtattcccgatcactttgcctccttta
aggcaacgtaaggaagatatttcattattggttaaccattttttgattaaattcaacaaa
aaaataggtaagcagattgacataatcactcaggatgctctgaatacattgcagcaacat
caatggcctggcaatgtgcgagagctggagagtgccattgaacgagccgtcatcctcagt
gaagggaaatcactgcaaatactcgatcgattcgaaagctttgataaactcgctactatc
gaggaaccttcgatgaaagctctggttgagttagaatatgagcatattgtcaaagtcttg
cagcagactggttggcggatagaaggtaataaaggcgctgcacttatcctcggtctcaat
cccagtactttacgagcgagaatgcgcaaacagggtatcactcggcagtag
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