Shewanella frigidimarina: Sfri_1067
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Entry
Sfri_1067 CDS
T00395
Name
(GenBank) sodium ion-translocating decarboxylase, beta subunit
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00362
Benzoate degradation
sfr00620
Pyruvate metabolism
sfr00650
Butanoate metabolism
sfr01100
Metabolic pathways
sfr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Sfri_1067
00650 Butanoate metabolism
Sfri_1067
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sfri_1067
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_1067
Enzymes [BR:
sfr01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Sfri_1067
Transporters [BR:
sfr02000
]
Other transporters
Primary active transporters [TC:
3
]
Sfri_1067
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
SBF
Motif
Other DBs
NCBI-ProteinID:
ABI70920
UniProt:
Q085Z5
LinkDB
All DBs
Position
1260428..1261558
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AA seq
376 aa
AA seq
DB search
MEGLLAFWAETGVANFTGGQLLMMAVGCLLLFLAIIKGFEPLLLLPIGFGAILANIPNAG
FTDEGGLLYYAYHVGIETGVFPLLIFMGVGALTDFGALIANPKTLLLGAAAQFGIFSTLI
GAIALNWVPGFEFSMQDAAAIAIIGGADGPTAIFLASKLAPELLGAIAVAAYSYMALVPL
IQPPIMKLLTTKAEREIKMEQLREVSKKEKIIFPLMVLGLTILFLPAATPLIGMFCLGNL
MRESGVVDRLSKTAQNELINIVTIFLGLAVGSKLSADQFLRIETLGILILGAVAFSIGTA
SGVLMAKLMSKLSGGKINPLIGAAGVSAVPMAARVVNKVGLEANNQNFLLMHAMGPNVAG
VLGSAVAAGVLLAVLG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggaaggattattggctttttgggctgaaacgggtgtcgctaactttactggtggccaa
ctgttaatgatggctgtgggttgtttattgttatttctagcgataattaaaggatttgag
ccgttattgttattacctattggatttggtgccatattagccaacattcctaatgcaggt
tttaccgacgaaggtggcttactgtattacgcttatcatgtcgggattgagactggggtg
ttcccattgcttatcttcatgggtgttggtgcattaactgattttggggcactcattgct
aatcctaaaacattattgttaggcgcagcggcacaatttgggattttctcaaccttaatt
ggtgctattgccttaaattgggtgcctgggtttgagtttagtatgcaagatgctgcggct
attgccattattggtggcgcagatggtccgacggcgattttcttagcctctaaactggcg
cctgaattgttaggggcgattgccgttgctgcatattcatacatggcgttagtgccatta
attcagccgccgatcatgaaactgctcactaccaaagcagaacgtgaaattaaaatggaa
caattgcgtgaagtcagtaagaaagagaaaattatctttccactgatggtattagggtta
accattttatttttacccgcagcaaccccattaattggtatgttctgtttgggcaattta
atgcgcgaatcgggtgtggtggatcgtttatcgaaaacggcacaaaatgaattaatcaac
atagtgacgatctttttaggtcttgctgttgggtctaagctctcagcagatcaatttttg
cgtatcgaaacgctaggtattttaatccttggcgcggttgcgtttagtattggtactgct
tcaggggtattgatggctaaattaatgagtaagctctctggcggaaaaattaacccgctt
attggcgccgctggcgtttctgctgtaccaatggctgcacgtgtggttaataaggttggt
ttagaggctaacaaccaaaacttcttactcatgcatgccatggggcctaacgttgcaggt
gtgctaggtagtgccgttgctgctggtgtcttgttggcagtattaggctag
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