Shewanella frigidimarina: Sfri_1101
Help
Entry
Sfri_1101 CDS
T00395
Name
(GenBank) malate synthase A
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00620
Pyruvate metabolism
sfr00630
Glyoxylate and dicarboxylate metabolism
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr01120
Microbial metabolism in diverse environments
sfr01200
Carbon metabolism
Module
sfr_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Sfri_1101
00630 Glyoxylate and dicarboxylate metabolism
Sfri_1101
Enzymes [BR:
sfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
Sfri_1101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
DUF658
Motif
Other DBs
NCBI-ProteinID:
ABI70954
UniProt:
Q085W1
LinkDB
All DBs
Position
1300467..1302119
Genome browser
AA seq
550 aa
AA seq
DB search
MTAEQLVAQYSKSTASRDDSVKTDLTFIGPTVNGQEEVFNSGAVAFLDSLCAKFVDEVPE
LLAKRKQKQARIDNGELPDFLPETRAIRDGNWTIRGMPEDLTDRRVEITGPVDRKMIINA
LNANVKVFMADFEDSLAPSWQKIVEGQINLRDAVRGDIELTVPETGKHYSLNPDPAVLIA
RVRGLHLIEKHIEYKGKPIPGGLVDFAMYFYHNYRQLLAKKSGPYFYIPKLESHIEARWW
AKMFAFVEERFCLQPGTIKCTCLIETLPAVFEMEEILYELRSNIVALNCGRWDYIFSYIK
TLKNYPDRVLPDRQAVTMDTKFLSAYSRLLIKTCHKRGALAMGGMAAFIPAKDEATNELV
LQKVRGDKELEARNGHDGTWVAHPGLADTAMKIFNDYIGGDRTNQLHITRDVDAPILASE
LLEPCQGERTEAGMRLNIRIALQYIEAWIQGNGCVPIYGLMEDAATAEISRTSIWQWIQH
GKSLSNGKLVTKALFKDMLKEETANVKKELGAERFNAGEFAKAAELFEQITTSDELVDFL
TLPGYELLTA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagaacaattagtagctcaatacagtaagtccacagcaagtcgtgatgattcg
gttaaaactgatctcacgtttattgggcctactgttaatggccaagaagaagtttttaac
tctggtgccgtggctttccttgattcgttatgtgcaaaatttgttgatgaagtacccgag
ctattagctaagcgtaagcaaaaacaagcccgtattgataatggtgagttacctgatttt
ttacctgaaactcgtgcaattcgtgatggtaattggactatccgtggaatgcctgaagat
ctcactgatagacgtgttgaaattaccggccctgttgatcgtaagatgatcatcaatgct
ttaaacgctaatgtaaaagtgtttatggccgactttgaggattcattagcaccgagttgg
caaaaaattgtcgaaggacaaattaaccttcgtgatgccgtgcgcggtgatattgaacta
actgtccctgaaacaggtaagcattattcgttaaatccggatcctgcagtgttaattgct
cgtgtacgtggtttgcatcttattgaaaagcacattgaatacaaaggcaaacccattcct
ggcggcttagtcgattttgctatgtacttttaccataattatcgtcaacttttagctaaa
aaatctggaccttacttttatattcctaagttagaaagccatatagaagcgcgttggtgg
gcgaaaatgtttgcctttgtagaagaacgtttttgcttacagcctggcaccattaaatgt
acttgtttaattgaaacattacctgcggtatttgaaatggaggagattctttatgaactt
cgttcaaacattgtcgcgctgaattgtggccgttgggattatatcttcagctacatcaaa
accttaaagaactatcctgatcgtgtgctacccgaccgtcaagcggtaactatggatact
aaatttttaagtgcctattcacgcttattgattaaaacttgccataaacgtggcgcatta
gccatgggcggaatggcagcatttattcctgccaaagatgaagcaactaacgaactggta
ttacaaaaagtacgtggcgataaggagttagaagctcgcaatggtcatgatggtacttgg
gttgctcatccgggtttagccgacacagcgatgaaaattttcaatgattacatcggtggc
gatagaaccaatcaattacacattactcgtgatgtcgatgcacccattttagccagcgaa
ttactcgagccttgtcaaggcgagcgaactgaagcgggtatgcggttgaacattcgtatt
gcgttgcagtacatcgaagcgtggatccagggcaatggttgcgtaccgatttacggtttg
atggaagatgctgccacagcagaaatatcgcgtacttctatttggcaatggatccagcat
ggtaaaagtttatccaatggcaaactggtcactaaagcattgtttaaagacatgttgaaa
gaggaaacggccaacgtgaaaaaggaacttggcgcggagcgttttaatgcaggtgagttc
gccaaagcggcagaattatttgaacaaattactacctctgatgagctagtcgatttctta
acattaccaggatatgaactgttaacggcgtaa
DBGET
integrated database retrieval system